Gene Mpop_1582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1582 
Symbol 
ID6312745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1706069 
End bp1707472 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content68% 
IMG OID642650306 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_001924281 
Protein GI188580836 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTACG ATCTCGTCGT CATCGGCACC GGCCCCGGCG GCTATGTCTG CGCCATCCGG 
GCGGCCCAGC TCGGGCTGAA GACCGCGGTG GTCGAGAAGC GGGCGACCCA TGGCGGCACC
TGCCTCAATG TCGGCTGCAT CCCGTCCAAG GCGCTGCTGC ACGCCTCGGA AGCCTTCGAG
GAGGCCAACA AGCACTTCTC GGAATTGGGC ATCGACGTCG GAACGCCGAA GCTCGACCTG
AAGAAGATGC AAGGCTTCAA GCAGGGCGGC GTCGACGGCA ACACCAAGGG CGTCGAGTTC
CTGCTCAAGA AGAACAAGGT CGATGCCTAT CACGGCCGCG GCCGCATCGC CGGGGCCGGC
CGCGTCGAGG TGATCTCGGA CGACGGCGGC AACCAGATGC TGGAGACCAA GAACATCGTC
ATCGCCACCG GCTCCGACGT GACGCGGCTG CCCGGCGTCG AGATCGACGA GAAGACGGTG
GTCTCCTCCA CCGGCGCCCT CGAACTCGCC GACGTGCCGA AGCGGCTCGT GGTGATCGGC
GCCGGCGTGA TCGGGCTCGA ACTCGGCTCG GTCTGGCGCC GGCTCGGCGC CGAGGTGACG
GTGATCGAGT ATCTCGACCG CGTGCTGCCG GGCATGGACG GCGAGGTCGG CAAGCAGTTC
CAGCGCATCC TGGCCAAGCA GGGCATGGTC TTCAAGCTTT CGACCAAGGT GACGGGGGTC
GAGGTGGCCG AGAAGGGCGG CGCGACCGTC ACCGTCGAGC CGGCTCAGGG CGGCGAGGCG
GAGACAATCG AGGCCGACGT GGTGCTCGTG GCCATCGGCC GCGTGCCCTT CACGGAAGGG
CTCGGGCTGG AGACGGTGGG GGTGGCCACC GACAACAAGG GCCGTATCGA GACCGACAGC
CACTACGCCA CCAACGTCAC CGGCATCTAC GCCATCGGCG ACGTGATCGC CGGGCCGATG
CTCGCCCATA AGGCGGAGGA CGAGGGCGTC GCGGTCGCCG AGATCCTGGC CGGGCAGGCG
GGGCACGTGA ATTACGGCGT GATCCCGAAC GTCGTCTACA CCTTCCCGGA GGTCGCCTCG
GTCGGCAAGA CCGAGGAGGA ACTGAAGAAG GACGGCATCG GCTACAAGGT CGGCAAGTTC
CCCTTCACGG CCAACGGCCG GGCCAAGGCC AACGGCACCA CCGACGGCTT CGTGAAGATC
CTCGCCGACG AGAAGACGGA TCGCGTGCTC GGCGTGCACA TCGTCGGCGC GGATGCCGGC
AACCTCATCG CCGAGGTCGC GGTGGCGATG GAGTTCGCGG CGTCTGCCGA GGACATCGCC
CGCACCTGCC ACGCCCATCC GACGCTGACG GAGGCGGTCA AGGAAGCCGC GCTTGCCGTC
GACAAGCGGG CGATTCACGT CTGA
 
Protein sequence
MSYDLVVIGT GPGGYVCAIR AAQLGLKTAV VEKRATHGGT CLNVGCIPSK ALLHASEAFE 
EANKHFSELG IDVGTPKLDL KKMQGFKQGG VDGNTKGVEF LLKKNKVDAY HGRGRIAGAG
RVEVISDDGG NQMLETKNIV IATGSDVTRL PGVEIDEKTV VSSTGALELA DVPKRLVVIG
AGVIGLELGS VWRRLGAEVT VIEYLDRVLP GMDGEVGKQF QRILAKQGMV FKLSTKVTGV
EVAEKGGATV TVEPAQGGEA ETIEADVVLV AIGRVPFTEG LGLETVGVAT DNKGRIETDS
HYATNVTGIY AIGDVIAGPM LAHKAEDEGV AVAEILAGQA GHVNYGVIPN VVYTFPEVAS
VGKTEEELKK DGIGYKVGKF PFTANGRAKA NGTTDGFVKI LADEKTDRVL GVHIVGADAG
NLIAEVAVAM EFAASAEDIA RTCHAHPTLT EAVKEAALAV DKRAIHV