| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1553 |
|---|
| Symbol | |
|---|
| ID | 6312857 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 1669780 |
|---|
| End bp | 1672044 |
|---|
| Gene Length | 2265 bp |
|---|
| Protein Length | 754 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 642650278 |
|---|
| Product | adenylate/guanylate cyclase with Chase sensor |
|---|
| Protein accession | YP_001924254 |
|---|
| Protein GI | 188580809 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4252] Predicted transmembrane sensor domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.333757 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGACAT CCGCCGTGTC TGGGCGCCGA GGAATTCTCG GTCTGATCGG CCGCCTCGGC
CGCCGCGTCG GACCGGGCCG CCTGCTGGCC GGCGGCCTGC TCGTGCTGCT GCTGCTCGTG
CGGATCGCCG ATCCGCCGCC GGTCGAGGCC CTGCGGGTGC GCACCTTCGA CGCGCTCCAA
GTGCTCGCGC CCCGGGTGCC GCCGGCCGAG CGCCCGGTGG CGATCGTCGA TATCGACGAG
GCGAGCCTGA AGGAATTCGG CCAGTGGCCC TGGGCCCGCA CCCGGCTCGC CGCGATCTGC
GGGAAGCTGC AGGAGGCCGG GGCGGCGATC GTCGCCTTCG ACATCGTCTT CTCCGAGCCC
GACCGCCTGT CGCCGCCGCT CCTGGCCGAG ACCCTGCCCG ACCTGAGCGA GGCGGCCCGC
GCCGACCTGC GGGCGCAGCC CGACAGCGAC CGGGTCTTCG CCGAGGCGAT CGGGCGGATG
CCGGTGGTGC TGGGCCAGAC CGCCGCGAGC ACCCCCGTCG CCTGGACCGG GGAGGGGCCG
CCGCCGCAGA CCGGCACCGC CGTGGTGGGC ACGGAGTTCG ACCCGGACCG GGCGCTGATC
GGCTTCCCCG GCCTGATCCG CAATCTGCCG GTGCTGGAGC GGGCCGCCGC GGGGCGGGGC
GTCTTCACCA TCAGCCCCGA GCGCGACGGC GTGGTGCGGC GGGTGCCGAT GGTGCTGCGG
GCGGGCGGCA CCGTGGTGCC GACACTCGCG CTCGACATCC TGCGGGTGGC GACCGGGGCG
GACACCCTCC TGATCCGGAC CGACGACACC GGCGTCGTCT CGATCCGCCT GCCCGAGCTG
ACCGTGCCGA CCGATCCGCG CGGGCAGATC TGGGTGCGCT TCAGCCCGCA CGATCCAGGG
CTCTACGTCT CGGCCAAGGA TCTCCTCAAC GGCACGGTCC CACCCGACCG GCTGCGCGAA
AAGATCGTGC TCGTCGGCAC CTCGTCCGTG GGCCTGCTCG ACAACCGCAC CACGCCGCTG
GACCGCTCGA TGCCCGGCGT CGAGATCCAT GCCCAGCTCC TTGAGAACCT GCTGACCGGC
GCGACTCTCA CCGTGCCGAA CGAGGCGACC CTGATCGAGG CCGGGGCGAC GGCGGCGGTG
TCGCTCGCCA TCATCCTGTT CGCGCCGATC CTCGGTGCGC TCGGCCTGCT GCTGTTCGGC
GGCCTCGTGG CGGGGCAGCT CGTGTTCCTG TCGTGGTACC GGTTCTCCAC GAACGGCATC
CTGTTCGACG CCACCTTCCC GCTGCTGACG ACCTTTCTCG TCTACCTCAC CCTGGTCTTC
ACCAACTATT TCCGCGAGCA GACCGGGCGG AAGCGGATCC GCGCCGCTTT CGGACGCTAC
CTGTCGCCGG CCCTGGTGGA GCAGCTCGCG CTCTCGCCCG AGCCGCTGCG GCTCGGCGGC
GAGGAGCGGC GCCTGACGAT CATGTTCTCG GACGTGCGCG GCTTCACCGC AATCGCGGAG
TTCTACAAGG ACGACCCCGC CGGTCTGACG GCGCTGATGA ACCGCTTCCT CACGCCGCTC
ACCCACGCGA TCCTCGACCG GCAGGGCACG ATCGACAAAT ATATGGGCGA CGCGATCATG
GCGTTCTGGA ACGCGCCGCT GCGCGACGAC GCCCACGAGG TTCACGCCGC GGCGGCCGCC
CTCGACATGC TGGCGCGGAT GGACGCCCTG AACGCCGCCC GCCGCAGCGA GGCGGAAGCG
GGCGGGCACC CGGTCCTGCC GCTGGATGTC GGGATCGGCA TCAACACCGG GTCGTGCGTC
GTCGGCAATA TGGGCTCCGA CCTGCGCTTC GACTATTCGG TGCTCGGCGA CCCCGTGAAC
GTCGCCTCCC GCCTCGAGGG GCAATCCAAG TTCTACGGGG TGAAGATCGT GCTGGGCGCG
GCGACGGCCG ACGCCATCCG CGACCGCTAC CCGGTGCTCG AACTCGATCG CGTGCGGGTG
AAGGGCAAGC AGGAGCCCGA GACCGTCTTC ACCCTCGTCG GCGACGAGGG TTTTCGGCGC
TCCGAGCCGT TCGCCCGCCT CGCCGAGCGG CATGCGGCGA TGATTGCGGC CTACCGCGCC
CGGCAATGGG ACGAGACCCG CGCGGCGGCC GACGCCTGCC GCGCCCTCGC CCAGGGGCTA
AGGATCGACG GCCTCTACGC GCTCTACGCG GCACGCGCCG AAGCCTTCCT GCGCGAGCCG
CCCCCCGAGG AGTGGGACGG CGTCACCGTC GCCACCGCGA AGTAG
|
|---|
| Protein sequence | MRTSAVSGRR GILGLIGRLG RRVGPGRLLA GGLLVLLLLV RIADPPPVEA LRVRTFDALQ
VLAPRVPPAE RPVAIVDIDE ASLKEFGQWP WARTRLAAIC GKLQEAGAAI VAFDIVFSEP
DRLSPPLLAE TLPDLSEAAR ADLRAQPDSD RVFAEAIGRM PVVLGQTAAS TPVAWTGEGP
PPQTGTAVVG TEFDPDRALI GFPGLIRNLP VLERAAAGRG VFTISPERDG VVRRVPMVLR
AGGTVVPTLA LDILRVATGA DTLLIRTDDT GVVSIRLPEL TVPTDPRGQI WVRFSPHDPG
LYVSAKDLLN GTVPPDRLRE KIVLVGTSSV GLLDNRTTPL DRSMPGVEIH AQLLENLLTG
ATLTVPNEAT LIEAGATAAV SLAIILFAPI LGALGLLLFG GLVAGQLVFL SWYRFSTNGI
LFDATFPLLT TFLVYLTLVF TNYFREQTGR KRIRAAFGRY LSPALVEQLA LSPEPLRLGG
EERRLTIMFS DVRGFTAIAE FYKDDPAGLT ALMNRFLTPL THAILDRQGT IDKYMGDAIM
AFWNAPLRDD AHEVHAAAAA LDMLARMDAL NAARRSEAEA GGHPVLPLDV GIGINTGSCV
VGNMGSDLRF DYSVLGDPVN VASRLEGQSK FYGVKIVLGA ATADAIRDRY PVLELDRVRV
KGKQEPETVF TLVGDEGFRR SEPFARLAER HAAMIAAYRA RQWDETRAAA DACRALAQGL
RIDGLYALYA ARAEAFLREP PPEEWDGVTV ATAK
|
|---|
| |