Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1381 |
Symbol | |
ID | 6314063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 1496904 |
End bp | 1497575 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 642650107 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_001924083 |
Protein GI | 188580638 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.526175 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCGAC CGATGAACCA GACCCAGCGC CTCAGGCAGA CGATCGAGGA CGAGATCGTC GAGGGGCGCC TCGCCCTCGG GGCGCGGCTC GACGAGACGC TCCTCGCCGA GCGCTTCGGC GTCTCCCGCA CCCCGATCCG CGAGGCGCTG CTGCAACTGG CCGCGACCGG CCTCGTGGAG ACCAAGCCGC GCCGCGGCAT GGTGGTGAGC GCCCCCGAGC CGGGGCATCT CCTGGAGATG TTCGAGACGA TGGCGGAGCT GGAAGCCGCC TGCGGCCGGC TCGCCGCGCG CCGCCTCACG CCGGAGCTGG AGGCCGAGCT GACGGCAGCG GTCGCGGCCT GCGCGCGGGC GGCCAAGGCG GGCGATCCGG AGGCCTATTA TGGCGAGAAC TACGTCTTCC ACACGGTGAT CTACCGGGCC TGCCGCAACG ATTTCCTGTG CGGACAGGCG CTGGCACTGC ACCGCCGCCT CTCGCCCTAC CGGCGGCTGC AACTGCGCGC CCGCCACCGG GTGGCGCAGT CGCTCGCCGA ACACGAGGCG GTGGTCGCGG CGATCCAGGC GGGCGACGGC GCCGCGGCGG CCGATCAGCT CCGGCGCCAC GTGCTGATCC AGGGCGATGG GTTTTCGGAG CTGGTGGCCA ACCTGCGGGC GCTCGATCAC AGCGCGGCGT GA
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Protein sequence | MTRPMNQTQR LRQTIEDEIV EGRLALGARL DETLLAERFG VSRTPIREAL LQLAATGLVE TKPRRGMVVS APEPGHLLEM FETMAELEAA CGRLAARRLT PELEAELTAA VAACARAAKA GDPEAYYGEN YVFHTVIYRA CRNDFLCGQA LALHRRLSPY RRLQLRARHR VAQSLAEHEA VVAAIQAGDG AAAADQLRRH VLIQGDGFSE LVANLRALDH SAA
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