Gene Mpop_1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1304 
Symbol 
ID6313899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1405109 
End bp1406854 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content75% 
IMG OID642650021 
ProductABC transporter related 
Protein accessionYP_001924010 
Protein GI188580565 
COG category[O] Posttranslational modification, protein turnover, chaperones
[C] Energy production and conversion 
COG ID[COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000457543 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGAC GATCCCCCCG CGCCCGTTCC GGCCGCGCCG CCCTAGAGCA TCGTCCCGAA 
AGGTGGCTGC CGGCTTTCGG AAAAAGACGA TGTAAAAACA AGAGCCTAGC GCATCGTCCC
GGATCCGATA TCCGGGACGA TGCGCTAGAG CCCGCGGCGC TCGTCCTCGC CCATGGGGCG
GCGCGGGCCG GCCTGTCGCG CCTGCACGCC CTCCAGGCGC TGCGCTGCGC CGCGACGCTG
GGGCTCGCCG TGGCGCTGGC GTGGCTCGCG GGCGCGCTGA TCGAGACGGG AGCGCTCGAC
GGGATCGCGC TCGGCCTCGC CGGGGCCTGC CTCCTTGCGG GGGCCGGGCT CGGAAGCCTG
ATCGAGGCGC GCAGCGCCGC CCTGGAGGCG GCGGTCGCCG TCGCGCTCGT CGATTCCGCC
GAGGCGCGGC TCGCCGCGAT GCCGGCCCGC GCCGCCGCCG ACCTGCCGCG CGGCGCGGTG
ATCGCCGGCC TGCAGCGGCA TCCCGGTGCG CTCGCCCGCC TCGTCGTCGG CCATGCCGCG
GCGCGGCGGA TGATGGCGCT CGGGCCGGTG CTGACGGCGG GGGCGGTCGC GCTGGTGTCC
TGGCAGGCGG CCGTCGCGCT GCTCCTCGCC ACGCCGGTGA TGATCGTGTT CTTCGCCCTC
GTCGGCGGCC TGATCCGCGA CCGGGCCGCC GTGCAGGAGG CGGCGCTCGG GCGCCTCGCC
ACACAGTTCG CCGACCGGGT GCGGGTGCTG CCGACAATCC TCGCCGCCCA CGGCCTGCCG
CGCGAGACGG CCAAGCTCGA CCGGCGGCTC AAGACTTACG CCGACGGCAC CATGGGCGTG
CTGGCGGTGG CCTTTCTGAA TGCGGGCGTG CTCGACTTCT TCGCCTCGCT CGCCATCGCG
ATCCTGGCGG TGTTCCTCGG ACTCGGCCAT CTCGGCCTCG CCGAGATTCC GGGTTTCGCG
CATCTGGCGC TGTGGCAGAG CCTGCTGATC CTGCTGCTCG CCCCCGAGTA TTTTCTGCCG
TTCCGCCGCT ACGCCGAACT CTACCATGCC AAGGCCGAGG GCGAGGCCGC GGCCGAGGCA
CTGGCCTGGG TCTTTTCGGA AGACGCCGAG ACGACGCCCG AGCGCGGCGC GGTTCCCGCA
ATGCCGGGCG CCCGCGGCCT CGTCCTGCCC CATGCCGGGC CCGTCGCCGA TTTCGATCTG
CCGGAGACCG GGCTCGTCGC CGTGACCGGG CCGAGCGGGG CGGGTAAATC GACGCTGCTG
CGGGTTCTCG CCGATGTCGA GGCGCCGCTT GCCGGGGCTT TTCGCCTGCC GGGGCCGGGC
GTTGCCGCGA CCTGGGTCTC CCTCGACACG CCGATCCCGG CGGGCACGCT CGGCGCGGCG
ATCGCGGACG GCACGACCGC GACGGCGGAA GCCGTGGCGA CCGCCGCCGC GACCCTCGAC
TTGAGCGAGG ATCCGCACTG GCCCGGCGGC CTCGACGCCC CCGTGCGGGC AGGCGCCGAA
AACCTCTCCG GCGGCCAGCG GGTCCGGGTC GCCGTCGCGC GCCTGCTGCT GCGACCGGGC
CCCGCCTTCT GTGACGAGCC GACCGCCAAG CTCGACCCCG ACAACGCCGC GCGGGTTCGC
CGAGCCCTGG CCCGCGCCGC CCGCACCCGC CTCATCATCG TGGCGACCCA CGATCCCACC
CTCGCGGCGC TCGCCGACCG GCGCATCGCC CTCGGTGCCA TCCCTTCCGA GAAGCAGGCG
GCCTGA
 
Protein sequence
MTRRSPRARS GRAALEHRPE RWLPAFGKRR CKNKSLAHRP GSDIRDDALE PAALVLAHGA 
ARAGLSRLHA LQALRCAATL GLAVALAWLA GALIETGALD GIALGLAGAC LLAGAGLGSL
IEARSAALEA AVAVALVDSA EARLAAMPAR AAADLPRGAV IAGLQRHPGA LARLVVGHAA
ARRMMALGPV LTAGAVALVS WQAAVALLLA TPVMIVFFAL VGGLIRDRAA VQEAALGRLA
TQFADRVRVL PTILAAHGLP RETAKLDRRL KTYADGTMGV LAVAFLNAGV LDFFASLAIA
ILAVFLGLGH LGLAEIPGFA HLALWQSLLI LLLAPEYFLP FRRYAELYHA KAEGEAAAEA
LAWVFSEDAE TTPERGAVPA MPGARGLVLP HAGPVADFDL PETGLVAVTG PSGAGKSTLL
RVLADVEAPL AGAFRLPGPG VAATWVSLDT PIPAGTLGAA IADGTTATAE AVATAAATLD
LSEDPHWPGG LDAPVRAGAE NLSGGQRVRV AVARLLLRPG PAFCDEPTAK LDPDNAARVR
RALARAARTR LIIVATHDPT LAALADRRIA LGAIPSEKQA A