| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1258 |
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| Symbol | |
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| ID | 6313283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 1349360 |
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| End bp | 1351075 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642649975 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001923964 |
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| Protein GI | 188580519 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.564674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00861873 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACCAAGA ACTCCAAGAC AGGGCCTGTC GACCGCTTTC TGTCGGAATA CAAAGCCGGA
CATCTCGACC GACGCGCCTT CATCCAGTCC GCGATGTCGG TTGGATTGAC GGCTGCCGTC
GCACAATCCC TGTCCCTGGC CGCATCGGGG CATGCCTTCG CCAAGACGAC CCGGGAGGTG
GAGCCCGACT CCGAGGCCTA CGACTACATC GTGGTCGGCG CGGGGTCCTC CGGCGGGACC
TTCGCGGGCA CCCTCGCGAT GCAGAGCGAT GCCCGTATCC TCGTCCTCGA AGCGGGCGGC
GTCGATTCGG CCCCGGAGAT TCACAACCCG CGGGATTGGG CCCTGACGCT CGACAAGCGG
TATGTGCGGC ACTTCAAGAC CGTCCCGCAG AAGAATGTCG GCGGTCGCGT CATCGACTGG
CCCCGCGCGG AAGTCCTCGG CGGCTGCAGC AGCATCAACG CGATGATCTA CTGCCGCGGC
AACAAGGCCG ATTACGAGTC CTGGGCCGCC GCCGGCAACA AGGACTGGGA CTACGCGTCC
GTCCTGAAGG ATTACAAGGC GCTCGAGGAT TGGCAGGGCG GCGCCAACGC CTATCGCGGC
ACCGGCGGCC CGCTCCACGT GACCCAGCCG GCCCCCGGCC GGCGGAGCGC GGGCGGCGCC
ATGTTCATCG AAGGCGCCGA GTCGCTCGGC TACAAGGAAA CGCCCGACTT CAACGGCGCG
CAGTTCGAGG GTCCGGCCTG GGTCAACTTC ACGATCTACG ACGGCAAGCG GCAATCGACG
GCCGTCGCGT TCCTGAAGCC CGCCATGGAG ACGCGCAAGA ACCTGACGGT CCTGACCGAG
GCGCCGGTGA CACGGCTCAT CGTCGAGGGC GGCCGCTGCA CCGGCGTGGA GTACCTGCAC
GCCGGAAAGC CGGTGAAGGT GAAGGCCAAC AGCGAAGTCA TCGTCACGGC CGGTGCGGTC
GCGACCCCGT GGCTGATGAT GCTGTCCGGC CTCGGTCCGG CCGCCGACCT GCGCAAGCTG
GGTATCCCCG TCGTCGCGGA TCTGCCGGGC GTCGGCCAGA ACCTCCAGGA TCACGTCCTG
GGCGCGGGCG TCAACTACGA GGCGAAGGCT CCCCTTGCGC CGTCGTTCTA CAATGCCTCC
GAAGTCTACA TGTGGTCGAA GTCGGACAGT TCATTGAAGC ATCCGGACAT CGCCACGCTT
TATCTCGATA TCCCGTTCGC GACGCCGGAC CTGCCGTTCA CCGTCAAGAA CGGCTACTCG
ATCCTGTGCG GCGTCATGCA GCCCCAGTCG CGCGGCAGCA TCCGGCTCGC CTCGGCCGAT
CCGCGCGTCG ACCCGCTGAT CGATCCCAAC TACCTGGGCA CCGATCAGGA TTTCAAGGCG
CTCAAGGCCG GGATGGATCT TGCGCGGGAG ATCGGCGCGA GCGCGGCGTT CTCAAGTCTC
CGCAGCAAGG AGATCCTGCC GGGACCGGCG GCCGACAAGG CGGCCTATCA AGACTTCCTG
CGGCGCTCCG TCTGGACCTA CTTCCATCCG ACCAGCACCT GCCGGATGGG CACGGATGAC
ATGGCCGTCG TGGACGAGAC GCTGCGCGTG AAGGGCGTGA AGGGCCTGCG CATCGCCGAC
GTTTCGGTTC TTCCGCACAT CACGACGGGC AACACCAACG CCCCCGCGAT CCTGGTCGGC
TGGCGCGCGG CGAAACTCCT GAGACAGCAG GGCTAA
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| Protein sequence | MTKNSKTGPV DRFLSEYKAG HLDRRAFIQS AMSVGLTAAV AQSLSLAASG HAFAKTTREV
EPDSEAYDYI VVGAGSSGGT FAGTLAMQSD ARILVLEAGG VDSAPEIHNP RDWALTLDKR
YVRHFKTVPQ KNVGGRVIDW PRAEVLGGCS SINAMIYCRG NKADYESWAA AGNKDWDYAS
VLKDYKALED WQGGANAYRG TGGPLHVTQP APGRRSAGGA MFIEGAESLG YKETPDFNGA
QFEGPAWVNF TIYDGKRQST AVAFLKPAME TRKNLTVLTE APVTRLIVEG GRCTGVEYLH
AGKPVKVKAN SEVIVTAGAV ATPWLMMLSG LGPAADLRKL GIPVVADLPG VGQNLQDHVL
GAGVNYEAKA PLAPSFYNAS EVYMWSKSDS SLKHPDIATL YLDIPFATPD LPFTVKNGYS
ILCGVMQPQS RGSIRLASAD PRVDPLIDPN YLGTDQDFKA LKAGMDLARE IGASAAFSSL
RSKEILPGPA ADKAAYQDFL RRSVWTYFHP TSTCRMGTDD MAVVDETLRV KGVKGLRIAD
VSVLPHITTG NTNAPAILVG WRAAKLLRQQ G
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