| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1255 |
|---|
| Symbol | |
|---|
| ID | 6313280 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 1345384 |
|---|
| End bp | 1346253 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642649972 |
|---|
| Product | Citrate (pro-3S)-lyase |
|---|
| Protein accession | YP_001923961 |
|---|
| Protein GI | 188580516 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2301] Citrate lyase beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.327749 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0181011 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTC GGACTCTTCT CTTCTGCCCT GCGGATGCGG AACGCAAAAT CGCCCGAGCC
CTCGGATCCT CCGCGGACGT CGTCATCCTC GATCTGGAGG ACAGCGTCGC CGCGCGCACG
AAAGAGGCGG CGCGATCGAC TGCGGCGCAG GTCCTTGCCG GCGCGTCCGG CTGGTCGAAC
ATCGTGGTCC GGATCAATCC GCAGGACACG CCCTGGTACC TCGATGACCT GGCGACCCTG
GTGCCGCAGA AGCCCACGGC GATCGTTCTG CCGAAATGCA GCGCGCCCGA GGATTTGCAG
CGGCTCGACC ACCATCTCGA GGTTCTGGAA CATGCCAACG GATTGCCGCC CGGCATGATC
GGCATCCTGC CGCTGGTGAC CGAGTCGGCC ACCGCGCTGC AAAGCCTGAA TTACGGCTAT
GCGACGTCGC GGCTGCGCGC GCTTCTCTTC GGCGCCGAGG ACTTGGCCGT CGATTTCGGG
ATCGCGCCGC GGAGCGAGGA CGGGGCGCTG GCAGCCCCTC TCGCCGCCGC CCGAGCGATG
CTGCTGGTGG CCGCCGCGCA GGCTCAAGTG CCGGCGATCG ACACGCCCTG GCCCAATCCG
CATCCATCAC CGGCCTTCGA TGCGGAGGTC GCGGCCGCCG TCCGGGATGG ATTTGCGGGT
AAGCTGTGCA TCCACCCGAA CCAGCTCGAA GCCGTCGCGA CGGCCTTCAC GCCGTCGCCT
GAACGGGTCC GGTGGGCCCA ATCCGTCTAC AAGCTCTTCA TGGACAATCC CGGATCGGGC
GTCATGGTCC TGGACGGCGA GATGATCGAC CGGCCGCATA TGCGCCTGGC CGAGCGCATC
CTCGATGCGG CGGCCGATGC GTCTCCGTAG
|
|---|
| Protein sequence | MKLRTLLFCP ADAERKIARA LGSSADVVIL DLEDSVAART KEAARSTAAQ VLAGASGWSN
IVVRINPQDT PWYLDDLATL VPQKPTAIVL PKCSAPEDLQ RLDHHLEVLE HANGLPPGMI
GILPLVTESA TALQSLNYGY ATSRLRALLF GAEDLAVDFG IAPRSEDGAL AAPLAAARAM
LLVAAAQAQV PAIDTPWPNP HPSPAFDAEV AAAVRDGFAG KLCIHPNQLE AVATAFTPSP
ERVRWAQSVY KLFMDNPGSG VMVLDGEMID RPHMRLAERI LDAAADASP
|
|---|
| |