Gene Mpop_1215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1215 
Symbol 
ID6309007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1300470 
End bp1302296 
Gene Length1827 bp 
Protein Length608 aa 
Translation table11 
GC content67% 
IMG OID642649933 
ProductGTP-binding protein TypA 
Protein accessionYP_001923922 
Protein GI188580477 
COG category[T] Signal transduction mechanisms 
COG ID[COG1217] Predicted membrane GTPase involved in stress response 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.378082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.59958 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGC GCAACATCGC CATCATCGCC CACGTCGACC ACGGCAAGAC GACGCTGGTC 
GACAAGCTGC TCCAGCAGTC CGGCACCTTC CGCGAAAACC AGCGGGTCGA GGAGCGGGCG
ATGGACTCGA ACGACCTCGA GAAGGAGCGC GGCATCACCA TCCTCGCCAA GGCGACTTCG
GTCGTCTGGC AGGACACCCG CGTCAACATC GTCGACACCC CCGGCCACGC CGATTTCGGC
GGCGAGGTCG AGCGCATCCT CTCGATGGTC GACGGCGTGA TCGTGCTCGT CGATGCCGCG
GAAGGGCCGA TGCCGCAGAC CAAGTTCGTG GTCGGCAAGG CGCTCAAGAT CGGGCTTCGC
CCGATCGTGG CCATCAACAA GGTCGACCGG CCGGACGCCC GCATCAACGA GGTCGTCAAC
GAGGTGTTCG ACCTGTTCGC GGCGCTCGAC GCCACCGACG AGCAGCTCGA CTTCCCGATC
CTCTACGGCT CCGGCCGCAA CGGCTGGATG GCCGATTCGC CCGACGCCTC GCCGGATGTC
GGCCTCGCGC CGCTGTTCGA CCTCGTGCTC AAGCACGTGC CGCAGGCCCG CGTCGAGGAC
GGCCCGTTCC GGATGCTCGG CACGCTGCTC GAAGCCAACC CGTTCCTCGG CCGCATCATC
ACCGGGCGCA TCGCCTCGGG CACGGTGAAG CCGAACCAGT CGATCAAGGT GCTCTCGCGG
GACGGCAAGG TCGTGGAGAC CGGCCGCGTC TCGAAGATCC TCGCCTTCCG CGGCCTTGAG
CGGGCTCCCA TTGACGTCGG CGAGGCCGGC GACATCGTCT CCATCGCCGG TCTGCTCAAG
GGCACCGTGG CCGACACCTT CTGTGATCCG GCCGTCAACG AGCCGATCCA GGCCCAGCCG
ATCGACCCGC CGACCGTCAC CATGTCCTTC ATCGTCAACG ACTCGCCGCT GGCCGGCACC
GAGGGCGACA AGGTCACGAG CCGCATGATC CGCGACCGCC TGTTCAAGGA GGCCGAGGGC
AACGTCACGC TCAAGATCGA GGAAGCCGCC GACAAGGACT CGTTCTACGT CTCCGGCCGC
GGCGAGCTGC AGCTCTCGAT CCTGATCGAG ACCATGCGCC GCGAGGGGTT CGAGATCGCC
GTGTCCCGGC CGCGCGTCGT CCTGGAGAAG GACGAGGCCG GCGAGATCCT GGAGCCGGTC
GAGGAAGTCG TGATCGACGT CGACGAGGAA TACTCGGGCG TCGTCGTGCA GAAGATGTCC
GAGCGCAAGG CCGAGATGAT CGAGATGCGG CCCTCGGGCG GCAACCGGCT CCGGCTCGTC
TTCCACGCGC CGACCCGCGG CCTCATCGGC TACCAGGGCG AGCTGATGAC CGACACCCGC
GGCACCGCGA TCATGAACCG CCTGTTCAAG GCCTACGAGC CCTACAAGGG CGAGATCGCC
GGCCGCCGCA ACGGCGTGCT GATCTCGAAC GACAAGGGTG AGGCCGTGGC CTACGCCATG
TGGAACCTCG AGGACCGCGG CCCGATGATG ATCGAGCCCG GCGCCAAGGT GTACCAGGGC
ATGATCGTCG GCGAGCACAA CCGCGAGAAC GACCTCGAGG TGAACGTGCT CAAGGGCAAG
AAGCTCACCA ACATCCGCAC CACCTCGAAG GACGAGGCCG TGCGCCTGAC GCCGCCGATC
CGGATGACGC TGGAGAAGGC GCTGGCCTGG ATTCAGGACG ACGAGCTGAT GGAAGTCACG
CCGAAGTCGA TCCGCCTGCG CAAGATCCAC CTCGATCCGA ACGAGCGCAA GCGCTTCGAG
CGTTCGAAGG AAGCGCTGAC GGGCTGA
 
Protein sequence
MKLRNIAIIA HVDHGKTTLV DKLLQQSGTF RENQRVEERA MDSNDLEKER GITILAKATS 
VVWQDTRVNI VDTPGHADFG GEVERILSMV DGVIVLVDAA EGPMPQTKFV VGKALKIGLR
PIVAINKVDR PDARINEVVN EVFDLFAALD ATDEQLDFPI LYGSGRNGWM ADSPDASPDV
GLAPLFDLVL KHVPQARVED GPFRMLGTLL EANPFLGRII TGRIASGTVK PNQSIKVLSR
DGKVVETGRV SKILAFRGLE RAPIDVGEAG DIVSIAGLLK GTVADTFCDP AVNEPIQAQP
IDPPTVTMSF IVNDSPLAGT EGDKVTSRMI RDRLFKEAEG NVTLKIEEAA DKDSFYVSGR
GELQLSILIE TMRREGFEIA VSRPRVVLEK DEAGEILEPV EEVVIDVDEE YSGVVVQKMS
ERKAEMIEMR PSGGNRLRLV FHAPTRGLIG YQGELMTDTR GTAIMNRLFK AYEPYKGEIA
GRRNGVLISN DKGEAVAYAM WNLEDRGPMM IEPGAKVYQG MIVGEHNREN DLEVNVLKGK
KLTNIRTTSK DEAVRLTPPI RMTLEKALAW IQDDELMEVT PKSIRLRKIH LDPNERKRFE
RSKEALTG