Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1203 |
Symbol | |
ID | 6314002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 1287256 |
End bp | 1288233 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642649921 |
Product | secretion protein HlyD family protein |
Protein accession | YP_001923910 |
Protein GI | 188580465 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0133764 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.454228 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTGGCCC TCGGTGTGGC CGTCTATTTC TACTGGCTGA TCAACCTGCA TCCCTACGAG ACCACCGACG ACGCCTTCGT GGATGCGCGC AGCTTCACGG TCGCGCCGAA GGTCGGCGGC TACGTCGTCG CCGTGCCGGT GACCGACAAC CAGCATGTCA GGGCCGGCGA CACGCTGTTC CAGATCGACC CGCGCGACTA TCGCGTCGCC CTCGAACAGG CCGAGGCGCA GGTTCAGGCG GCCCAGGCCT CGATCCGTAA CGTCGATGCC CAGATCGAGG CGCAGAAGGC GCAGGTCGAG GCGGCCAAGG CCCAGGTGGA GACGGCGCAG GCGGCGCTGA CCTTCGCCGA GGAGGATGCC GACCGCTACC GGAAGCTCGC CGAGCGGGGT GCCGGCACGA TCCAGCAGTC GCAATCCTCG ACCTCGACCC TGGAACAGCG CCAGGCCTCC CTGGCGAACG CGAAGGCGAA CGTGGTCGCC GCCCAGAAGC AGATCGGCTC GCTTCAGGCT CAGCGCGCCA GCGCCGAAGC GCAACAGGCC CAGGCGGAGG CGCAGCGCGA CCAAGCCCGG CTCAACCTCG GCTACACCAC CGTGACGGCC GCGCAAGGCG GCCGCGTGGT GCGCCTCACC GGTGCCGTCG GCGAATACGC CCAGGCCGGC CAGAGCCTGT CGATGTTCGT GCCCGACGAG ATCTGGGTGA CGGCGAACTA CAAGGAGACG CAGATCACCG ACATGCGGCC GGGCCAGCCC GTCGACATCA CGATCGACGC CTACCCGAAC CGCCGGATCA CCGGCCGGAT CGCCTCGGTG CAGCCGGGCT CCGGCACCGC CTTCAGCCTG CTGCCGGCGC AGAACGCCAC CGGAAACTAC GTGAAGGTGA CGCAGCGCAT TCCCGTGAAG ATCCTGGTCG ACAACTGGCC GAGCGATGTC GCGATCGGTC CCGGCATGTC GGTCGTGCCG AGGGCCCACG TCCGGTGA
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Protein sequence | MLALGVAVYF YWLINLHPYE TTDDAFVDAR SFTVAPKVGG YVVAVPVTDN QHVRAGDTLF QIDPRDYRVA LEQAEAQVQA AQASIRNVDA QIEAQKAQVE AAKAQVETAQ AALTFAEEDA DRYRKLAERG AGTIQQSQSS TSTLEQRQAS LANAKANVVA AQKQIGSLQA QRASAEAQQA QAEAQRDQAR LNLGYTTVTA AQGGRVVRLT GAVGEYAQAG QSLSMFVPDE IWVTANYKET QITDMRPGQP VDITIDAYPN RRITGRIASV QPGSGTAFSL LPAQNATGNY VKVTQRIPVK ILVDNWPSDV AIGPGMSVVP RAHVR
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