Gene Mpop_1181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1181 
Symbol 
ID6308910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1257440 
End bp1259245 
Gene Length1806 bp 
Protein Length601 aa 
Translation table11 
GC content66% 
IMG OID642649899 
ProductGTP-binding protein LepA 
Protein accessionYP_001923888 
Protein GI188580443 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0481] Membrane GTPase LepA 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.216806 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGC GCACCATCGA CAACATCCGC AACTTCTCCA TCGTCGCGCA TATCGACCAC 
GGCAAGTCGA CGCTTGCCGA CCGGCTGATC CAGCAGACCG GCACCGTGGC GCTGCGCGAC
ATGAGCGAGC AGATGCTCGA CTCGATGGAC ATCGAGCGCG AGCGCGGCAT CACCATCAAG
GCCAACACCG TCCGCCTCGA ATACAAGGCG GAGGACGGCC AGGATTACGT CCTCAACCTG
ATGGACACGC CCGGCCACGT CGATTTCGCC TATGAGGTGT CGCGCTCGCT CGCGGCCTGC
GAGGGCTCGC TGCTGGTGGT CGACGCCTCG CAGGGCGTCG AGGCGCAGAC GCTGGCCAAC
GTCTATCAGG CGCTCGACGC CAACCACGAG ATCGTGCCCG TCCTCAACAA GGTCGATCTG
CCGGCCGCCG AGCCCGACCG GGTGAAGGAG CAGATCGAGG AGGTGATCGG CCTCGACGCC
TCCGAGGCGG TGCCGATCTC GGCCAAGACC GGCCTCAACA TCGAGGCGGT GCTGGAAGCC
ATCGTCAAGC GCCTGCCCCC GCCCAAGGGC GACCGTGAGG CGCCGCTCAA GGCGCTCCTC
GTCGATTCCT GGTACGACGT CTATCTCGGC GTCGTCGTGC TGGTGCGCAT CGTCGACGGC
GTGCTCAAGA AGGGCATGAC CATCCGCATG ATGGGCGCGG ATGCGGCCTA CGGCGTCGAC
CGCATCGGCG TGTTCCGCCC GAAGATGGCC GATATCGGCG AACTCGGGCC CGGCGAGGTC
GGCTTCTTCA CCGGCTCGAT CAAGGAGGTG GCCGACACCC GCGTCGGCGA CACCATCACC
GAGGACAAGC GCCAGACCAC GCAGATGCTG CCGGGCTTCA AGGAGGTCCA GGCGGTGGTG
TTCTGCGGCC TGTTCCCCGT GGACGCCGCC GACTTCGAGA ACCTGCGCGG CGCCATGGGC
AAGCTGCGCC TCAACGATGC GAGCTTCTCC TACGAGATGG AGACCTCGGC CGCGCTGGGC
TTCGGCTTCC GCTGCGGCTT CCTCGGGCTC CTCCACCTCG AGATCATCCA GGAGCGCCTG
GAGCGCGAGT TCAATCTCGA CCTGATCTCG ACCGCGCCAT CGGTCGTCTA CCGACTGATG
ATGCGCGACG GCGAACTCAA GGAGCTGCAC AACCCGGCCG ACATGCCGGA CCCGATGAAG
ATCGAGACCG TCGAGGAGCC GTGGATCCGC GCCACGATCC TCACGCCCGA CGATTATCTC
GGCGGCGTCT TGAAGCTGTG CCAGGACCGG CGCGGCATCC AGATCGACCT CAACTACGTC
GGCAAGCGGG CCATGGTCGT CTACGACCTG CCGCTCAACG AGGTGGTGTT CGATTTCTAC
GACCGGCTGA AGTCGATCTC GAAGGGCTAC GCCTCCTTCG ACTACCACGT CTCCGATTAT
CGCGAGGGCG ACCTCGTGAA GATGTCGATC CTGGTCAACG CCGAGCCGGT GGACGCGCTG
TCCATGCTCG TCCACCGCAC CCGCGCCGAG AGCCGCGGCC GGGCGATGTG CGAGAAGCTG
AAGGACCTGA TCCCGCGTCA CCTGTTCCAG ATCCCGGTCC AGGCGGCGAT CGGCGGCAAG
ATCATCGCCC GCGAGACCAT CCGGGCTTTG TCCAAGGACG TGACCGCCAA GTGCTACGGT
GGCGACATCT CGCGCAAGCG CAAGCTTCTG GACAAGCAGA AGGAAGGCAA GAAGCGCATG
CGCCAGTTCG GCCGCGTGGA GATCCCGCAG GAGGCGTTCA TCGCCGCGCT GAAGATGGAC
GATTGA
 
Protein sequence
MTTRTIDNIR NFSIVAHIDH GKSTLADRLI QQTGTVALRD MSEQMLDSMD IERERGITIK 
ANTVRLEYKA EDGQDYVLNL MDTPGHVDFA YEVSRSLAAC EGSLLVVDAS QGVEAQTLAN
VYQALDANHE IVPVLNKVDL PAAEPDRVKE QIEEVIGLDA SEAVPISAKT GLNIEAVLEA
IVKRLPPPKG DREAPLKALL VDSWYDVYLG VVVLVRIVDG VLKKGMTIRM MGADAAYGVD
RIGVFRPKMA DIGELGPGEV GFFTGSIKEV ADTRVGDTIT EDKRQTTQML PGFKEVQAVV
FCGLFPVDAA DFENLRGAMG KLRLNDASFS YEMETSAALG FGFRCGFLGL LHLEIIQERL
EREFNLDLIS TAPSVVYRLM MRDGELKELH NPADMPDPMK IETVEEPWIR ATILTPDDYL
GGVLKLCQDR RGIQIDLNYV GKRAMVVYDL PLNEVVFDFY DRLKSISKGY ASFDYHVSDY
REGDLVKMSI LVNAEPVDAL SMLVHRTRAE SRGRAMCEKL KDLIPRHLFQ IPVQAAIGGK
IIARETIRAL SKDVTAKCYG GDISRKRKLL DKQKEGKKRM RQFGRVEIPQ EAFIAALKMD
D