Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1037 |
Symbol | |
ID | 6313221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 1102161 |
End bp | 1105892 |
Gene Length | 3732 bp |
Protein Length | 1243 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642649759 |
Product | ribonucleotide-diphosphate reductase subunit alpha |
Protein accession | YP_001923748 |
Protein GI | 188580303 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGTTCG AGCGGCGCTA CACCACGTCA GGCCAGTCTC CCTACGCATC CATCGCCTTC CGCAAGGCGG TGAGCGAGAT CCGCAACCCG GACGGATCGA TCGTCTTCCG GCTCGACGGC ATCTCGGTGC CGGAGAGCTG GAGCCAGGTC GCCGCCGACG TGCTGGCGCA GAAGTATTTT CGCAAGGCCG GCGTTCCCGC CCGCCTGAAG CGGGTCGAGG AGAACAGCGT TCCCTCGTTC CTGTGGCGCT CGGTGCCGGA TGAGGCCGCA CTGACCGCGC TGCCCGAGGA GGAGCGCTAT GTCTCCGAGA TCTCATCGAC CCAGGTGTTC GATCGTCTCG CCGGCTGCTG GACCTACTGG GGCTGGAAGG GCGGCTACTT CTCGTCGGAG GAAGACGCCT CGGCCTTCAT GGACGAGCTG CGCTTCATGC TCGCCCGCCA GATGGTGGCG CCGAACTCGC CGCAATGGTT CAACACCGGC CTGCACTGGG CCTACGGCAT CGATGGCCCG AGCCAGGGCC ATTTCTACTG CGACCCGAAG ACCGGCGCGC TGACGAAGTC GGCCACGGCC TACGAGCATC CGCAGCCGCA TGCCTGCTTC ATCCAGTCCG TGCAGGACGA CCTCGTCAAC GAGGGCGGCA TCATGGACCT GTGGGTGCGT GAGGCCCGCC TGTTCAAGTA CGGCTCCGGC ACCGGCTCCA ACTTCTCGAT GCTGCGCGCC GAGAACGAGC GGCTCGGCGG CGGCGGCAAG TCGTCCGGCC TGATGTCCTT CCTCAAGATC GGCGACCGGG CGGCGGGCGC GATCAAGTCG GGCGGCACCA CGCGGCGGGC CGCCAAGATG GTCATCGTCG ATATCGACCA CCCCGATATC GAGGCCTTCA TCGACTGGAA GGTGAAGGAG GAGCAGAAGG TCGCCGCGCT GGTGACCGGC TCCAAGGTCG TCTCGAAGCA CCTCACCGCG GTGATGAAGG CCTGCATCCA GTGCGAGGCG GAAGGCGACG CCTGCTTCGA CGCCGAGCGC AACCCGGCGC TCAAGCGCGA GATCAAGGCC GCCCGCAAGG CGATGGTGCC CGACGCCTAC ATCAAGCGCG TCGTGCAGTT CGCCCGCCAG GGCTTCACCA AGATCGAGTT CCCCGTCTAC GACACCGACT GGGATTCGGA GGCCTACCTC ACGGTCGCCG GCCAGAACTC CAACAACTCG GTCTCGCTGA CCGATACGTT CCTGCGCGCC GTCGAGGCCG ACGGCGACTG GAGCCTGACC GCCCGCACCA CGGGCAAGGT CACCAAAACC CTGAAGGCGC GCGACTTGTG GGAGAAGATC GGCGAGGCGG CCTGGGCCTC GGCGGATCCG GGCCTGCACT TCAACACGAC GATGAACGAC TGGCACACCT GCCCGACCGG CGGGCGGATC CGGGCCTCGA ACCCGTGCTC CGAGTACATG TTCCTCGACG ACACGGCCTG CAATCTCGCC TCGGCCAACC TGCTGACGAT GTACGACCGT CAGGCGAAGC ATTTCGACGT CGAGGCGTTC GAGCACCTCA ACCGTCTTTG GACGGTGGTC CTCGAAATCT CGGTGATGAT GGCGCAGTTC CCGTCCAAGG AGATCGCCGA GCTTTCCTAC AAGTACCGCA CGCTGGGCCT CGGCTACGCC AATATCGGCG GCCTGCTGAT GACCATGGGC CTGCCCTACG ACTCCGATCA GGGCCGGGCG CTGGCCGGCG CGCTCACCGC GATCATGACG GGCGTGGCCT ACGCCACCTC CGCCGAGATG GCGGCCGAAC TCGGGACCTT CGAGGCCTAT CCTGAGAACG CCGACCACAT GCTGCGGGTG ATCCGCAACC ACCGCCGCGC GGCGCATGGC GAGGCCACGG GCTACGAGGG CCTGAACGTC GCCCCCGTGC CGCTCGACCA CGCCAACATC CCGCAAGGCG ACATCGGCGC CCATGCCCGC GCGGCCTGGG ATCGCGCGCT GTCGCTCGGC GAGCAGCACG GCTACCGCAA CGCGCAGGCC ACCGTGATCG CGCCGACCGG CACGATCGGT CTCGTGATGG ATTGCGACAC CACCGGCATC GAGCCCGACT TCGCCCTGGT GAAGTTCAAG AAGCTCGCCG GCGGCGGCTA CTTCAAGATC ATCAACCGCG CCGTGCCGGA CGCTCTCCGG GCGCTGGGCT ACCGCGAATC CGAGATCGCC GAGATCGAGG CCTACGCCGT CGGCCACGGC TCGATGGGTC AGGCGCCCGC GATCAATCCC GGCTCGCTGC GCGCCAAGGG TTTTTCCGAC GACAAGATCG CGGCGGTGGA AGCCGGGCTG AAGTCGGCCT TCGACATCAA GTTCGTGTTC AACCGCTGGA CCCTCGGCGA CGATTTCCTC AAGGACACCC TCAAGGTGCC GGCGGAGAAG CTCGCCGATC CGACCTTCGA GCTGCTGCCG TTCCTCGGCT TCTCGAAGAA GGAGATCGAG GCCGCCAACA CCCATGTCTG CGGGGCGATG ACGCTGGAGG GCGCACCGTT CCTCAAGCGT GAGCACTATG CGGTGTTCGA CTGCGCCAAC CCCTGCGGAC GCACCGGCAA GCGCTACCTC TCGGTCGAGA GCCACATCCG CATGATGGCG GCGGCGCAGC CCTTCATCTC GGGGGCGATC TCCAAGACCA TCAACATGCC CAACGACGCC ACGGTCGAGG ATTGCAAGGC GGCCTACCTG CTGTCCTGGC GCCTCGCGCT CAAGGCCAAC GCCCTCTACC GCGACGGCTC CAAGCTGTCG CAGCCCTTGA ACGCCGCTCT GATCGCGGAC GACGAGGACG AGGCCGAGGA CGCGCTCGAG GCGATCATCC AGGCCCCGGC CGCAGCCAAG GCAGCGGCCG CCGCCGAGAA GATCGTCGAG CGGGTGATCG AGCGGGTCGA GCGCATCCGC TCGCGCGAAA AGATGCCGGA CCGCCGCAAG GGCTACACCC AGAAGGCAGT GGTCGGCGGA CACAAGGTCT ATCTGCGTAC CGGCGAGTAC GATGACGGGC GCCTCGGCGA GATCTTCATC GACATGCACA AGGAAGGCGC GACCTTCCGG AGCCTGATGA ACAACTTCGC CATCGCGATC TCGCTCGGCC TGCAATACGG CGTGCCGCTG GAGGAATACG TCGAGGCCTT CACCTTCACC CGCTTCGAGC CCGCGGGCTT CGTGCAGGGC AACGACGCGA TCAAGAACGC GACCTCGCTG CTCGACTACG TTTTCCGCGA ACTGGCCGTG TCCTATCTCG GCCGGACCGA CCTCGCCCAC GTCAACCCGG CCGAGATCGG CGGCACGGTG CTCGGCGGCG GCGAGGGCGA CACCACCCGC GAGTCGGCCA AGCCGGCCCC GGCGGCCTCG GCCATCGTCT CCCGCGGCCT ACTGCGCGGC TCGGCCGACC GGCTCACCTT GATCCAGGGA GGTCCGGGCA ACGCGACGAC GGGGGTCGCC GCAGCGGCCA CCGGCCAGTC GGCCCCGGCC GGCGGCACGG TCCACGCCGT CCACGGCGCC ACCGCCCTGA AAGCGGAGCC GCAGAGCGTC GGCAGCGTCG AGACGCTGCC CTTCGCCAAG CCGGAAGCCA AGGCCGAGCG CAGCGTCGCG GATCGGCGGG CCGAGGCGAA GATGAAGGGC TATGTCGGCG AGGCCTGCCC CGAATGCGCA AACTTCACGC TCGTCCGCAA CGGCACCTGC CTGAAGTGCG ACACCTGCGG AAGCACGACC GGGTGCTCAT AA
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Protein sequence | MRFERRYTTS GQSPYASIAF RKAVSEIRNP DGSIVFRLDG ISVPESWSQV AADVLAQKYF RKAGVPARLK RVEENSVPSF LWRSVPDEAA LTALPEEERY VSEISSTQVF DRLAGCWTYW GWKGGYFSSE EDASAFMDEL RFMLARQMVA PNSPQWFNTG LHWAYGIDGP SQGHFYCDPK TGALTKSATA YEHPQPHACF IQSVQDDLVN EGGIMDLWVR EARLFKYGSG TGSNFSMLRA ENERLGGGGK SSGLMSFLKI GDRAAGAIKS GGTTRRAAKM VIVDIDHPDI EAFIDWKVKE EQKVAALVTG SKVVSKHLTA VMKACIQCEA EGDACFDAER NPALKREIKA ARKAMVPDAY IKRVVQFARQ GFTKIEFPVY DTDWDSEAYL TVAGQNSNNS VSLTDTFLRA VEADGDWSLT ARTTGKVTKT LKARDLWEKI GEAAWASADP GLHFNTTMND WHTCPTGGRI RASNPCSEYM FLDDTACNLA SANLLTMYDR QAKHFDVEAF EHLNRLWTVV LEISVMMAQF PSKEIAELSY KYRTLGLGYA NIGGLLMTMG LPYDSDQGRA LAGALTAIMT GVAYATSAEM AAELGTFEAY PENADHMLRV IRNHRRAAHG EATGYEGLNV APVPLDHANI PQGDIGAHAR AAWDRALSLG EQHGYRNAQA TVIAPTGTIG LVMDCDTTGI EPDFALVKFK KLAGGGYFKI INRAVPDALR ALGYRESEIA EIEAYAVGHG SMGQAPAINP GSLRAKGFSD DKIAAVEAGL KSAFDIKFVF NRWTLGDDFL KDTLKVPAEK LADPTFELLP FLGFSKKEIE AANTHVCGAM TLEGAPFLKR EHYAVFDCAN PCGRTGKRYL SVESHIRMMA AAQPFISGAI SKTINMPNDA TVEDCKAAYL LSWRLALKAN ALYRDGSKLS QPLNAALIAD DEDEAEDALE AIIQAPAAAK AAAAAEKIVE RVIERVERIR SREKMPDRRK GYTQKAVVGG HKVYLRTGEY DDGRLGEIFI DMHKEGATFR SLMNNFAIAI SLGLQYGVPL EEYVEAFTFT RFEPAGFVQG NDAIKNATSL LDYVFRELAV SYLGRTDLAH VNPAEIGGTV LGGGEGDTTR ESAKPAPAAS AIVSRGLLRG SADRLTLIQG GPGNATTGVA AAATGQSAPA GGTVHAVHGA TALKAEPQSV GSVETLPFAK PEAKAERSVA DRRAEAKMKG YVGEACPECA NFTLVRNGTC LKCDTCGSTT GCS
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