Gene Mpop_1028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1028 
Symbol 
ID6309412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1094845 
End bp1095300 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content69% 
IMG OID642649750 
Product3-dehydroquinate dehydratase 
Protein accessionYP_001923739 
Protein GI188580294 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCGA TCCACTGCCT CAACGGGCCG AACCTCAACC TCCTCGGTCA GCGCGAGCCC 
GGCATCTACG GCGCGGCGAC CCTCGCCGAT ATCGAGCGCA GCCTGCAGGA ACAGGCGGCC
CGCCTCGATA TCGCCCTGAC CTTCCGTCAG ACGAATCACG AGGGCGAACT GGTGACGTTC
GTGCAGGAGG CGGGCGCTGC CGGGGCCGGA GTGCTCATCA ACGCCGCCGC CTACACGCAC
ACCTCGATCG CGCTGCGCGA TGCGATCGCG GGGGCGGGCG TGACGGCGGT GGAGATCCAC
CTCTCGAACG TCCATGCCCG CGAGGACTTC CGCCACGTCT CGCGGATCGC ACCGGTCTGC
GCCGGTTTGA TTTCGGGCTT CGGCGCCCAC AGTTACGTCC TCGGGCTCGA CGCCCTCGCC
CACCTCCTGC GCGGACGCTC CCCGTCCGCC TCCTGA
 
Protein sequence
MIAIHCLNGP NLNLLGQREP GIYGAATLAD IERSLQEQAA RLDIALTFRQ TNHEGELVTF 
VQEAGAAGAG VLINAAAYTH TSIALRDAIA GAGVTAVEIH LSNVHAREDF RHVSRIAPVC
AGLISGFGAH SYVLGLDALA HLLRGRSPSA S