| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1004 |
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| Symbol | |
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| ID | 6309705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 1066570 |
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| End bp | 1068243 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642649725 |
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| Product | beta-lactamase domain protein |
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| Protein accession | YP_001923715 |
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| Protein GI | 188580270 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
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| TIGRFAM ID | [TIGR00649] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00402664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.192677 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAC GGCAGGACGA ACTCGTCTTC GTGCCGCTCG GCGGCGTGGG CGAGATCGGG
ATGAACGCGG GCCTCTACGG GATCGGACCG GAGAAGCAGC GCAAGTGGAT CATGGTCGAT
TGCGGGATGG GGTTTGCCGG CGAGGAAGGC TTGCCCGGCA TCGATCTGAT GTTCCCCGAC
CTCACCTTCA TCGAGGAGCG CAAGAAGGAC CTTCTCGGCA TCTTCATCAC CCACGCGCAC
GAGGACCATA TTGGCGCGAT CTCGGAACTG TGGCCGCGGA TCAAGGCCCC GGTCTACGCC
ACGCGGTTCG CCAAGAACCT GCTGGAGACC CGCCGCCTCT CCGAGCCCGG CGCGCCGAAG
GTCGATCTGC GCGAGATCAA GCCGGGCCGG CGCGTGACGG TCGGGCCGTT CGAGATCGAG
TTCGTGCCGG TGGCGCACTC GATCCCGGAA TCGAACGCGG TGGCGATCCG CACCGAGCAC
GGTCTCGTGC TGCATACCGG TGACTGGAAG CTCGACGACA CGCCGGTCGC CGGCGACTCG
ACCTCGCCCG AGGCCTTCAC CGCGCTCGGC GACGAGGGCA TCCTGGCGCT CGTCTGCGAC
TCGACCAACG TGCTGCGCGA GGGCCGCTCG CCGAGCGAGA CCGAGGTCTC CGCAACGCTG
CGCAAGCTGA TCGAGAACGT GCCCCACCGC GTCGCGGTGA CGACCTTCGC CTCCAACGTC
GCTCGCATCC GTGCCGTGGC GGAGGCCGCC CAGGCCTGCG GCCGGCAGGT GATCGCGGTC
GGACGCGCCA TGGACCGGGT GATCGATGTC GCCCGCGAGT GCGGTTATCT CGACGGTCTG
CCGGACTTCC TCTCGGCCGA TTCCTACTCG CACCTGCCGC GCGACAAGGT GGTCTGCTTG
CTCACCGGTT CGCAGGGCGA GCCGCGGGCG GCGATGTCGC GGGTCTCGCG CCACGACCAT
CCGGCGATCT CGCTGACGGC CGGCGACCGG GTGATCTTCT CCTCGCGCGC CATTCCCGGC
AACGAGCGCG ATGTCGGCGC TATCATCAAC GACCTGATCG AGGACGGCAT CGAGGTCATC
ACCGACCGCA CCGAACTCGT CCACGTCTCC GGCCATCCGC GCCGGGAGGA GATGGTGGCG
ATGTATTCGT GGACGCGGCC GAAGGCGGTG GTGCCGGTCC ATGGCGAGGC GCTGCACCTC
GACGAGCACG CGCGCTTCGC CCGCTCGCAG GGCGTCGAGT CGGTGGTGAA GGCCCGCAAC
GGCGCGGTGG TCCGCCTCGC TCCGGGCAAG CCGGAGGTGG TCGAGCACGT CCGCGCCGGC
CGGCTCTACA AGGACGGCAA CGTCCTCATC GACTCCAAGG ACCGGGCGAT CCCGGAGCGG
CGCAAGCTCT CGCAGACCGG CATCGTCTCG GTGGCGCTCG CCATTGACGA GCGCGGCGAG
ATGGCCGGTG AGCCGGCGGT GGACATCATG GGCCTGCCCA ATCGCGGGCG CGGCGGCGAG
CCCTTGCTCG ACACCGTGGT CGATACGGTC AACCGGACGA TCAACGGCCT GTCGCGCGGC
AAGATGAAGG ACTCGGAGGC CGTGGAGAAC GCGGTCGATC GCGCCGTGCG CTCCGCCGTC
AATGAGGCCT GGGGCAAGAA GCCCGCCTGC CACGTGCAGG TGGTGGAGGT GTGA
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| Protein sequence | MTTRQDELVF VPLGGVGEIG MNAGLYGIGP EKQRKWIMVD CGMGFAGEEG LPGIDLMFPD
LTFIEERKKD LLGIFITHAH EDHIGAISEL WPRIKAPVYA TRFAKNLLET RRLSEPGAPK
VDLREIKPGR RVTVGPFEIE FVPVAHSIPE SNAVAIRTEH GLVLHTGDWK LDDTPVAGDS
TSPEAFTALG DEGILALVCD STNVLREGRS PSETEVSATL RKLIENVPHR VAVTTFASNV
ARIRAVAEAA QACGRQVIAV GRAMDRVIDV ARECGYLDGL PDFLSADSYS HLPRDKVVCL
LTGSQGEPRA AMSRVSRHDH PAISLTAGDR VIFSSRAIPG NERDVGAIIN DLIEDGIEVI
TDRTELVHVS GHPRREEMVA MYSWTRPKAV VPVHGEALHL DEHARFARSQ GVESVVKARN
GAVVRLAPGK PEVVEHVRAG RLYKDGNVLI DSKDRAIPER RKLSQTGIVS VALAIDERGE
MAGEPAVDIM GLPNRGRGGE PLLDTVVDTV NRTINGLSRG KMKDSEAVEN AVDRAVRSAV
NEAWGKKPAC HVQVVEV
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