Gene Mpop_0673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0673 
Symbol 
ID6312244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp716422 
End bp718353 
Gene Length1932 bp 
Protein Length643 aa 
Translation table11 
GC content74% 
IMG OID642649381 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_001923386 
Protein GI188579941 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.431385 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGGTGT TGCGTAAAGA CGGTGCCCTT GCCTCCCTCT TCGATTCCCG GCTCGCCGGG 
CTGGTCCATG CCTCCGCGCT GGCCGAGCCG GGCGTGCGCT TCCGCCACGA GCGCTTTCTC
ATTTCGCGGC TCGCCACCGG CGCGGTGATG ATGGCGGGCC TGCCGCCCTA CCTCGTCTGG
CGCGGCGTTC CGAGCGGCAT CGAAGCGCTC GCCATCGCGA GCCTGTTCCT GCCGCTCGTG
GCCGCCGTCA TCCTGTCGCG CACCGGCTCG CTCTGGATCG CGCACGCCCT GTCCTCGCTC
GGCCTGACCG GCATCGTCGT CTGCCTCGCC GCGCTCACCG GCGGCGCGAG TTCGGCCGCC
GCCATCTGGC TCGTGGCGGT GCCGCTGGAG GCGATGATCT CCGGCTCGCG CCGGGCGACG
ATCGCGGCCT CCGTCATCGC CGTCCTCGGC GCCTTCGCGG TGGCGCTGAG CGGCTACCTG
CCGGTGGGAA GCCTCGCGCT GGCCTGGCCC AACGCCGTCG TCATGCCGGT CTTCGCCGTG
ACCGCCATCG GCCACATCGC GGCCCAGGCG ATGGAGCACA TGCGCCGCGA GGGCGAGTGG
CGCGCGCGCA TGCAGGACAA CGAGGCCCGC GACCGCCTGC TGCTCTCCGC CATCGACGAC
CTCGTGACGT GGCACGACGC CAACGGCCGC GTGCTGGAGG CGAGCGGCTC GGCCGCCCGC
TTCGTCGGCG CCGAGGCGAG CCGGCTGCGC GGCCACGGCC TGCTCGACCG GGTGCATATC
GGCGACCGTC CGGCCCTGCT TCAGGCGATC AGCGACGTCG CCGCCCACGG CATGCCGGCG
ACGGTACCCT TCCGCCTGCA TCTCGACGCG CCGCGCGCCG ACGGCAGCCG CACCATCTAC
GCCGAGATGC GGGCGCACCG GATCGAGGCG GGGCTCGCCG GGGCCAACGG CTCGACCGTC
GTCGCCGTGA CCCGCGACGT GTCCGAACAT CGCCGCCACG CCCAGGAACT CGACCGCGCC
CGCGCCGAGG CCGAGCGCGC CGACGAGGTG AAGACCCACT TCCTCGCCAC CGTCAGCCAC
GAGCTGCGCA CGCCGCTCAA CGCCATCATC GGCTTCTCGG ACGTGCTGTC GGGGGAGGGC
GCGGTGAGCC TCTCGCCGGA GCGTTCCCGC GAATATGCCG GCATCATCGC CCAGTCCGGG
CGCCACCTGC TGGACGTGGT CAACACGCTG CTCGACATCT CGCGCATCCG CGGCGGCCAT
TTCGACTTCC AGCCGGAGCC GGTCGACGTC GAGGCGCTGA TCCGCAGCTG CTGCGACCTG
ATGCGGCTCA AGGCCGACGC CTCGGGGATC GCTCTGGTGA GCGCCCCGGT GCCGGCCGGC
TGCGCCCTCG TGGCCGATGC CCGCGCCTGC CGCCAGATGC TGATCAACCT GATCTCGAAC
GCCGTGAAGT TCACCCCCCG CGGCGGGCGG GTGGAGGTGA TGGTGCGCCG GGGCGGCGCC
TATCTCGACG TGGTGGTGAG CGACAACGGC ATCGGCATCA CCGAGGCCGA CCTGCCGCGG
CTCGGCGACC CCTTCTTCCA GGCCGGCGGC GGCTACGGCC GCAGCCACGA GGGCACCGGA
CTCGGCCTCT CGGTGGTGCG CGGCCTCGCC GGGCTGCACG GCGGCGCCGT CTCGGTCGAG
AGCGCGCCGG GGAAGGGCAC CGCGGTGACC GTGACCCTGC CGCTGGACTG CAGCCGTGCC
AAGGCCGCCG CGAAGGCCGG TCGAAACGGT GCGAACGGGA CGGCCGCGGA ACCGGCCCAG
CCGGCGCCGA TCCGGACGTC GGTGCGGGGC GCGGTGGTGC CGGAGCCGGC GCCCGAGCCG
ATCCGCCTGC CGGTCGGCCT GTTCGATCCC GCCCCGGTCT CCACGATCCC CCCGATGCGC
CGCGCCTCAT GA
 
Protein sequence
MVVLRKDGAL ASLFDSRLAG LVHASALAEP GVRFRHERFL ISRLATGAVM MAGLPPYLVW 
RGVPSGIEAL AIASLFLPLV AAVILSRTGS LWIAHALSSL GLTGIVVCLA ALTGGASSAA
AIWLVAVPLE AMISGSRRAT IAASVIAVLG AFAVALSGYL PVGSLALAWP NAVVMPVFAV
TAIGHIAAQA MEHMRREGEW RARMQDNEAR DRLLLSAIDD LVTWHDANGR VLEASGSAAR
FVGAEASRLR GHGLLDRVHI GDRPALLQAI SDVAAHGMPA TVPFRLHLDA PRADGSRTIY
AEMRAHRIEA GLAGANGSTV VAVTRDVSEH RRHAQELDRA RAEAERADEV KTHFLATVSH
ELRTPLNAII GFSDVLSGEG AVSLSPERSR EYAGIIAQSG RHLLDVVNTL LDISRIRGGH
FDFQPEPVDV EALIRSCCDL MRLKADASGI ALVSAPVPAG CALVADARAC RQMLINLISN
AVKFTPRGGR VEVMVRRGGA YLDVVVSDNG IGITEADLPR LGDPFFQAGG GYGRSHEGTG
LGLSVVRGLA GLHGGAVSVE SAPGKGTAVT VTLPLDCSRA KAAAKAGRNG ANGTAAEPAQ
PAPIRTSVRG AVVPEPAPEP IRLPVGLFDP APVSTIPPMR RAS