Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_0537 |
Symbol | |
ID | 6309020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 578926 |
End bp | 580122 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642649238 |
Product | ABC-2 type transporter |
Protein accession | YP_001923250 |
Protein GI | 188579805 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGCGC CCGCCCATCC CGCCCGAGGC GCCGCCCGCT CCCAAGGCCC CGCTCCCGCG CCGCTCGGCT TCGGCACGCA CGTGGCCAAC GTGCTCCGCC TCATCGTCAA GGAACTGCGC AGCATCCGCG CCGATCCGGT GATGCTGTTC CTCGTCCTCT ACGCCTTCTC CTTCGCCGTC GTCTCCGTCG CCTCCGGCGC CTCGACCGAG GCGCGCAACA TGACCATCGG CGTGGTCGAC GAGGATCACT CCGACCTGTC GCGGCAGATC GTGAGCGCCT TCAACCCGCC GCTGTTCAAG GAGGTCGTGC CGATCGGCCC CGACGAGGTC GATCCCGCCA TGGATACCGG CCGGCTGGTC TTCGTGATCG ATCTGCCCCC ACGCCTGCAG CGGGACGTCC TGTCCGGCCA CCCGACATCG ATCGAACTCG ATGTCGATGC CACGGCCATG ACCCAGGCCG GCAACGGCTC GGTCTACATC CAGACCATCA TCACCCAGGA GATCGCCGCC TTCGCCGCCC GCAGCGAACG CAACGATACG GCGCCGGTGC GGGTGGTGAC GCGGGCCAAG TTCAACCCGA ACCTCCAGAC GAGCTGGTTC ACCTCGGTGA TGCAGGTGAT CAACAACATC ACGCTGCTGA CGGTGATCCT CACCGGGGCG GCGCTGATCC GCGAGCGCGA GCAGGGCACC GTGGAGCACC TCTTGGTGAT GCCGCTGGTG CCGATCGAGA TCATGCTCGC CAAGGTCATC GCCAACGGGA TGGTGATCCT CGTGGCGGCG GGGTTCTCGC TGCTCATCGT GGTCGAGTGG TGGCTCGGCG TGCCGATCGC CGGCTCCATC GCCCTGTTCC TGTTCGGGGC GGGCCTCTAC GCCCTCGCCG TCGCGGCGCT GGGGATCCTG CTCGGCACCA TCGCCACCTC CATGGGACAG TTCGGGCTGC TGGTGATCCC GGTGCTGCTG CTGATGCAGC TTCTCTCCGG CAGCAGCACG CCGATGGAGA GCATGCCGGT CTGGCTGCAA TACGTCGTGC AGACCGTGAG CCCGACGCCG CACTTCGTCG CCCTCGCCCA GGCCGTCCTC TACCGCGGCG CGGACCTTTC CATCGTCTGG CCGCAGCTCC TCGCCCTCAT CGCCCTGGGC AGCGTCTATT TCGCCTTCGC CCTCGCCCGC TTTCGCCGCG TGATCTTCGG AGACTGA
|
Protein sequence | MAAPAHPARG AARSQGPAPA PLGFGTHVAN VLRLIVKELR SIRADPVMLF LVLYAFSFAV VSVASGASTE ARNMTIGVVD EDHSDLSRQI VSAFNPPLFK EVVPIGPDEV DPAMDTGRLV FVIDLPPRLQ RDVLSGHPTS IELDVDATAM TQAGNGSVYI QTIITQEIAA FAARSERNDT APVRVVTRAK FNPNLQTSWF TSVMQVINNI TLLTVILTGA ALIREREQGT VEHLLVMPLV PIEIMLAKVI ANGMVILVAA GFSLLIVVEW WLGVPIAGSI ALFLFGAGLY ALAVAALGIL LGTIATSMGQ FGLLVIPVLL LMQLLSGSST PMESMPVWLQ YVVQTVSPTP HFVALAQAVL YRGADLSIVW PQLLALIALG SVYFAFALAR FRRVIFGD
|
| |