Gene Mpop_0522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0522 
Symbol 
ID6314147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp559871 
End bp561187 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content76% 
IMG OID642649223 
ProductFmu (Sun) domain protein 
Protein accessionYP_001923235 
Protein GI188579790 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0621766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.207218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGGCC TCGCGGCGCG TCACGTCGCG CGCGAGGCGG TGGCGACGCT GGTTGGCCCC 
GCCCGCGGCC TGGCGCTGGA GGATGCCCTC GCCCAGGCGG CACGGGGCGC GCGGCTGGAA
CCGGGCGAGG CCGCCCTCGC CCGGGCGATC GCGACGGCGA GCTTCCGTCG CCTCGGCTTC
ATCCAGGCGG CGCTCGCCGC CCGGCTGCGG GACGGCCTGC CGGAGAACCG GCCCCACCTC
CTTGCGCTGC TGGTGACCGG CGCCGCGCAG ATCCTCGATC TCGCGGTGGC CGACCACGCC
GCCGTCGATC TCTCGGTGCG TCTCGCCAAG GCGGACCCGC AGCTCCAGCA CCTCGCGCCC
CTCGTCAACG CCGTCCTGCG CCGGATCGTC CGGGAGCGCG ACGCGATCCG GGCCGAGGAG
ACCGATCCGC TCGCCCACAA CACGCCGGAC TGGCTCGCCC GCCGCTGGCG CGCGGCCTAC
GGCGAGGCGG CGGCCCGCGC CATCGCGACC GCCCATCTGG AAGGCGCGGC GGTCGATCTC
ACGCTGGCGC GTGACCCGGA GATCTGGGCG GAGCGGCTCG GCGGTGTCCG CCTCGATCTC
GGCTCCGTGC GGCTGGTCGA GGCGCGGGAG GCGGTGGCCG ATCTCCCCGG CTACGCGGAG
GGCGCGTGGT GGGTGCAGGA CGCCGCCGCC GCCCTGCCGG TGCGGCTGCT CGCGCCGGTA
TCGGGGGAGC GGGTCGCCGA TCTCTGCGCG GCGCCGGGGG GCAAGACGGC CCAGATCGCC
GCCGCGGGCG CGGCGGTGAC GGCAATCGAC CGGTCCGCCG GCCGCCTGGA ACGCCTCGGG
CGCAACCTCG AACGCCTCGG CCTCACCGCC GAGGTCGTGA CCACCGACGC TCTCGCCCTG
CCGGAGGACA CGCCCTTCGA CGCGGTGCTG CTCGACGCGC CCTGCTCGGC GACCGGCACC
CTCCGCCGCC ATCCGGACGT CGCTTGGACG AAGAGCGAGA CGGACGTGTT CCGCCTCGTC
GGCCTCCAGC GCCGGCTCCT CGACAAGGCG GCGCGGCTGA CGCGGCCCGG CGGACGCCTC
GTCTACTGCA CCTGCTCCCT CGAACCCGAG GAGGGCAGCG GGCAGATCGC GGATTTCCTG
AACCGCCATC CGAATTTCGA GCGGATCGCG ATCACACCCG ATCGAGTGGC CGGCCATGCC
GAGCTGATCG ACCCGTCGGG CGACCTTCGC ACCCTGCCGA GCCATCTGGC CGGCGGCACC
GGACGGGCAG GCGGCCTCGA CGGCTTCTTC GCCAGCCTGC TGCGGCGGAA GGACTGA
 
Protein sequence
MPGLAARHVA REAVATLVGP ARGLALEDAL AQAARGARLE PGEAALARAI ATASFRRLGF 
IQAALAARLR DGLPENRPHL LALLVTGAAQ ILDLAVADHA AVDLSVRLAK ADPQLQHLAP
LVNAVLRRIV RERDAIRAEE TDPLAHNTPD WLARRWRAAY GEAAARAIAT AHLEGAAVDL
TLARDPEIWA ERLGGVRLDL GSVRLVEARE AVADLPGYAE GAWWVQDAAA ALPVRLLAPV
SGERVADLCA APGGKTAQIA AAGAAVTAID RSAGRLERLG RNLERLGLTA EVVTTDALAL
PEDTPFDAVL LDAPCSATGT LRRHPDVAWT KSETDVFRLV GLQRRLLDKA ARLTRPGGRL
VYCTCSLEPE EGSGQIADFL NRHPNFERIA ITPDRVAGHA ELIDPSGDLR TLPSHLAGGT
GRAGGLDGFF ASLLRRKD