| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0497 |
|---|
| Symbol | |
|---|
| ID | 6308908 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 529665 |
|---|
| End bp | 530498 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642649198 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001923210 |
|---|
| Protein GI | 188579765 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0623] Enoyl-[acyl-carrier-protein] reductase (NADH) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.917513 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.103636 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGGTT TGATGGCGGG CAAGCGCGGC CTCATCATGG GGGTCGCCAA CGATCACTCG
ATCGCGTGGG GCATCGCCAA GACCCTGCAC CGGCACGGAG CGGAACTCGC CTTCACCTAT
CAGGGTGATG CGCTGGGGCG CCGGGTCGCC CCGCTCGCCG CCTCGGTCGG GTCCGACATC
GTGCTGCCCT GCGACGTCGA GGATCTCGCC ACGGTCGATG CCGCCTTCGC CACCCTCGAC
CAACGGTTCC CCGACGGGAT CGACTTCATC GTCCACGCCA TCGGCTTCTC GGACAAGGCG
CAGCTCAAGG GCCGCTACGT CGATGTCACG ACCCGCGCGA ACTTTTCGCG CACCATGACG
ATCTCCTGCT TCTCCTTCAC CGAGATCGCC CAGCGCGCCG CCGCGCGGAT GCCGCGGGGC
GGTTCGCTGC TGACGCTGAC CTATGCCGGC TCCACCCGCG TGATGCCGAA CTACAACGTG
ATGGGCGTGG CCAAGGCCGC GCTCGAAGCC TCGGTCCGCT ATCTGGCCAG CGACCTCGGC
CCGGACGGCA TCCGCGTCAA CGCCCTCTCT GCCGGCCCGA TGCGGACGCT GGCGGGCGCC
GGCATCGCCG ATGCCCGGCT GATGTACAAC CACCAGAAGG CGCACGCCCC GCTGCGGCGC
ACGGTGACGC TGGACGATGT CGGCAATTCG GCCCTCTATC TGCTCTCCGA CCTCTCGGGC
GGCGTGACCG GCGAGATCCA CTTCGTCGAT TCGGGCTACA ACATCATCTC GATGCCGCGC
CCGGCGGTGC TTCAGGCCCA GGACGAGGCG GGCGTCGTCG GCGACGACGT GTGA
|
|---|
| Protein sequence | MTGLMAGKRG LIMGVANDHS IAWGIAKTLH RHGAELAFTY QGDALGRRVA PLAASVGSDI
VLPCDVEDLA TVDAAFATLD QRFPDGIDFI VHAIGFSDKA QLKGRYVDVT TRANFSRTMT
ISCFSFTEIA QRAAARMPRG GSLLTLTYAG STRVMPNYNV MGVAKAALEA SVRYLASDLG
PDGIRVNALS AGPMRTLAGA GIADARLMYN HQKAHAPLRR TVTLDDVGNS ALYLLSDLSG
GVTGEIHFVD SGYNIISMPR PAVLQAQDEA GVVGDDV
|
|---|
| |