| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0395 |
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| Symbol | |
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| ID | 6312043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 418679 |
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| End bp | 421771 |
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| Gene Length | 3093 bp |
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| Protein Length | 1030 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 642649095 |
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| Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_001923108 |
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| Protein GI | 188579663 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
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| TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.250397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.629543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCTC CACGCTTCCA GGCTCCCTAC GCGCCGGACG ATGCCGCCCT GGCCGAGGCG
CTGCTGCGGG AGGCGCCGCT ACCGGCGGGT GCGGAAGCGG CCGTCGATCG GCTCGCCGCC
GACCTCATCG ACGCGATCCG CGCGGATGCC GGCCACGGCG CGGTCGAGGC GCTGCTGCGG
GAATACGCGC TCACGACCCG CGAAGGGCTC GCCCTGATGA GTCTCGCCGA GGCGCTGCTG
CGGGTGCCCG ACGCGGCCAC CGCCGACCGG CTGATCGCCG ACAAGCTGCG CGAGGGCGAT
TTCGCCCACC ACGCGGTGCG CTCGGAGAGC GGGCTGGCTC AGGCCGCGTC CTGGGCGCTC
GGCCTCGGCG CCCGCCTCGT CGGCCCGGAG GATACGCCCG AGGCGACGCT GGGTGGCATG
GTCCGGCGTC TCGGACGCCC GGCGGTGCGC GCGGCGGCGC ACCGGGCGAT GCGGCTGATG
GGCGGGCAAT TCGTGCTGGC GGAGGAGATC GGCGCCGCGC TCAAGCGCGC CGGCTCGGGC
GCCGCCCGGC GCTCGCGCTA CTCCTTCGAC ATGCTGGGCG AGGGCGCCCG CACGGCGGAG
GACGCGGAGA GCTACCGCCA GGCCTATGCC CGCGCCATCG CCCGGATCGG CCGGGAGGCC
GGCAACGCGC CCCTGCCGGC CCGGCCCGGC ATCTCGGTCA AGCTCTCGGC GCTCCATCCG
CGCTACAGTC CGACGCAGGG CGCACGGGTG ATGGCCGAAC TGGTGCCGGT GGTGCGCGAT
CTCGCCCGCG CGGCCCGCGC CCACGATCTC AACTTCACCC TCGACGCCGA GGAGGCCGAA
CGGCTCGAAC TCTCCCTCGA CGTGTTCGCA GCGGTGCTGG CCGATCCGAC GCTCGCCGGC
TGGGACGGGT TCGGACTCGC GATCCAGGCC TATTCCAAGC GCTGCCTGCC GGTGATCGAC
CACGTGGCGC AGTTGGCCGA GCGGCACGAC CGGCGGCTGA TGGTGCGCCT CGTCAAGGGC
GCCTACTGGG ACACCGAGGT GAAGCTTGCC CAGATTCAGG GTGCGCCCGA CTATCCCGTC
TTCACCCGCA AGGCGATGAC GGACCTGAAC TATCTGGCCG CCGCCCGACG GCTGCTGGAC
CACCGCCCGC GGCTCTATCC GCAATTCGCC ACGCACAACG CGCTGACGGT GGCGAGCGTG
CTCGGGCTGG CCGGCCTCCT CGACCGTCCC GCCACCGAGG AGGCCGGGTT CGAATTCCAG
CGCCTGCACG GCATGGGCGA GGCGCTCTAC GAGCGGCTGG CCGAGCGGGC TCCGGGCATC
GGCCAGCGGA TCTACGCGCC GGTCGGCGGG CACCGCGAAC TGCTCGCCTA TCTCGTGCGA
CGCCTGCTGG AGAACGGGGC GAACGCCTCC TTCGTCGCCC GCGCCGCCGA CCCGGCGGTG
CCGGTGACAC AGCTTCTCGC CCGGCCGCAA ACCCTCGTCG AGACACCCTC CCAGGCCCGC
CACCCCGAGA TCCCGCTGCC GCGCGACCTG TTCGGAGCGG AACGCCGCAA CGCGCCGGGG
CTGGCCTTCG GTGACGGTGC GGCGCTGCGG CGGCTGACCG GATCGGTCGC CGCCGCGGCC
GGTTCCGCCG ATGCGACGCC GCTCATCGAC GGGACCGTTC AGGCCGGCCA AGCCCGGCCG
GTCCTGAGCC CGATCGACGG GACCGCTCTC GGCAGCGTCA CGGAGGCCGA CGAAGCCATC
GCCGCGCGCG CCATGGACGC CGCCGCCCGC GGCTTTCCCG CCTGGGCCGC GACACCCGCC
GACGCGCGCG CCGCCTGTCT GGAGCGGGCG GCGGAGGCCT TCCTGCGCGA GCAACCGCGC
CTGCTGCACC TGCTGCAGGC CGAGGCCGGA AAGACTCTGG ACGACGCCGT CGCCGAGTGG
CGTGAGGCGA TCGACTTCCT GCGCTACTAC GCGGTGCAGG GCCGGCGTCT GTTCGCGGAG
CCGCAGAGCC TGCCCGGCCC GGCGGGCGAG GCCAACAGCC TGCGCCTGAG CGGGCGCGGG
GTGTTCGCTG CGGTCTCGCC GTGGAATTTT CCCCTCGCGA TCTTCACCGG GCAGGTCGCC
GCGGCACTGA TGGCCGGCAA CGCGGTCGTC GCCAAGCCGG CGCCGCAGAC ACCGCTGGTG
GCGGACCTTG CCCTGCGCCT CCTGCACGGG GCCGGCGTAC CGGGAAGCGC CCTGCACCTC
GTTCCCGGCG GTCCGGAGAC CGGCGCCGCG CTGATCGGGC ATGCGGCGCT CTCCGGCGTC
GTCTTCACCG GCTCAACGGC AACGGCGCAG GCGATCAATC GGGCGCTGGC CGCCCGCGAC
GGCGCGATCC TGCCGCTGAT CGCCGAGACC GGCGGCATCA ACGCGATGAT CGTCGATGCC
ACCGCGCTGC CCGAGCAGGT GGCCGACGAC GTGGTGGTCT CGGCCTTCCG CTCCGCCGGG
CAGCGCTGCT CGGCCCTGCG CCTGCTCCTC GTGCAGGAGG ATGTCGCCGA CCGGATGATC
GCGGCGGTGG CCGGCGCGGC GCGGGAACTG ACGGTGGGCG ATCCCGGCGA CCTCGCGACC
GATCTCGGTC CGGTGATCGA TGCATCGGCC AAGCGGCGCC TCGACGCGCA TATCGCGGCG
ATGGCCCGGT CGGCGCGCAC GCATGTCTCC GGCGCGGATC CGGGCGGGCT CTACGTGGCG
CCGCACATCT TCGAGATCGG CGGCGTCTCC GACCTGCGGC AGGAGGTGTT CGGTCCGATC
CTCCACGTCG TCCGATACCC GGCAAGCGGC CTTACCGCGG TAATCGAGGC GATCCGGGCC
GGGGGCTACG GGCTCACCCT CGGCATCCAT TCGCGCATCG ATGAGACGGC CGAGCGGATC
GCCGACGCGC TGCCGCACGG CAACGTCTAC GTGAACCGCA ACATGATCGG TGCGGTCGTC
GGCAGCCAGC CCTTCGGCGG CACCGGCCTT TCGGGCACCG GCCCGAAGGC CGGCGGCCCG
CATTACCTCG CCCGCTTCGC GACCGAGCGG ACGCTCACCG TCAACACCGC TGCGGCGGGC
GGCAGCGTCG GGCTCATCAC CCTCGACGGG TGA
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| Protein sequence | MSSPRFQAPY APDDAALAEA LLREAPLPAG AEAAVDRLAA DLIDAIRADA GHGAVEALLR
EYALTTREGL ALMSLAEALL RVPDAATADR LIADKLREGD FAHHAVRSES GLAQAASWAL
GLGARLVGPE DTPEATLGGM VRRLGRPAVR AAAHRAMRLM GGQFVLAEEI GAALKRAGSG
AARRSRYSFD MLGEGARTAE DAESYRQAYA RAIARIGREA GNAPLPARPG ISVKLSALHP
RYSPTQGARV MAELVPVVRD LARAARAHDL NFTLDAEEAE RLELSLDVFA AVLADPTLAG
WDGFGLAIQA YSKRCLPVID HVAQLAERHD RRLMVRLVKG AYWDTEVKLA QIQGAPDYPV
FTRKAMTDLN YLAAARRLLD HRPRLYPQFA THNALTVASV LGLAGLLDRP ATEEAGFEFQ
RLHGMGEALY ERLAERAPGI GQRIYAPVGG HRELLAYLVR RLLENGANAS FVARAADPAV
PVTQLLARPQ TLVETPSQAR HPEIPLPRDL FGAERRNAPG LAFGDGAALR RLTGSVAAAA
GSADATPLID GTVQAGQARP VLSPIDGTAL GSVTEADEAI AARAMDAAAR GFPAWAATPA
DARAACLERA AEAFLREQPR LLHLLQAEAG KTLDDAVAEW REAIDFLRYY AVQGRRLFAE
PQSLPGPAGE ANSLRLSGRG VFAAVSPWNF PLAIFTGQVA AALMAGNAVV AKPAPQTPLV
ADLALRLLHG AGVPGSALHL VPGGPETGAA LIGHAALSGV VFTGSTATAQ AINRALAARD
GAILPLIAET GGINAMIVDA TALPEQVADD VVVSAFRSAG QRCSALRLLL VQEDVADRMI
AAVAGAAREL TVGDPGDLAT DLGPVIDASA KRRLDAHIAA MARSARTHVS GADPGGLYVA
PHIFEIGGVS DLRQEVFGPI LHVVRYPASG LTAVIEAIRA GGYGLTLGIH SRIDETAERI
ADALPHGNVY VNRNMIGAVV GSQPFGGTGL SGTGPKAGGP HYLARFATER TLTVNTAAAG
GSVGLITLDG
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