Gene Mpop_0299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0299 
Symbol 
ID6308774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp318575 
End bp319105 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content70% 
IMG OID642649001 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_001923016 
Protein GI188579571 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGATA TGGTCCGCCT CATCGAGCCG CTCATCCCGG CCCTTCGCCG GTATGCCCGC 
GCGCTCCTGC GCAACCCGGC CGATGCCGAC GACCTTGTCC AGGACTGTCT GGAGCGCGCC
ATCGGACGCT GGCATCAGCG CCGGGCGGAG GGCGACGTGC GTACGTGGCT CTACGCCATC
CTCCACAATC TCGCTGTCAG CCAGATGCGC CAGCATGCCC GCCGTGGTGC GTCCATGCCC
TTCGAAGACG CGCCGGAGGC GATCCTCGCC GTTGCACCGG ACCAGCATGA GAGCCTGCTT
CAACGCGACC TGACGGCGGC GCTCGATGCG CTGCCCGAGG AGCAGCGCGG CGTGCTGCTC
CTCGTGAGTG TGGAGGGGCT CTCCTACGCC GAGGCAGCCC AGGTGCTCGC CATCCCGATC
GGGACGGTGA TGTCGCGCTT GGCCCGCGCG CGCGACCGGA TGATCCAGCT CATGGACGGG
GAGCGCGCAT CCGCCCCCGC CGGGCGTCCA CTGCTCAGGA GGGTAAAGTG A
 
Protein sequence
MSDMVRLIEP LIPALRRYAR ALLRNPADAD DLVQDCLERA IGRWHQRRAE GDVRTWLYAI 
LHNLAVSQMR QHARRGASMP FEDAPEAILA VAPDQHESLL QRDLTAALDA LPEEQRGVLL
LVSVEGLSYA EAAQVLAIPI GTVMSRLARA RDRMIQLMDG ERASAPAGRP LLRRVK