Gene Mpop_0298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0298 
Symbol 
ID6308773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp317805 
End bp318578 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content75% 
IMG OID642649000 
Productputative transmembrane anti-sigma factor 
Protein accessionYP_001923015 
Protein GI188579570 
COG category[K] Transcription 
COG ID[COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTGC GCCCGATCAC CGAGGACGAC ATCCAGGCCT TCGTCGACGA GCGCCTGGAG 
GCGCCGCGCA GGGCCGAGGT CGAGGCCTAC CTCGCTCGCC ATCCCGAACT CGGCCGACGC
GTCGAGCGCA TGCGCGGGCT CGGCGACGCG TTGCGCGACG CCTTCGCGCC GGTGGCCGCC
GAGCCGGTTC CGGCCCAGCT CAACCTCGCC CACCTCATCG AGGCGCGACG GCGCCCGCGT
CTGCCCGCTT GGCAGGCCGC GGCGGCGGCC GTGCTGCTGG CCCTCGGAGG CATCGGCGGC
TGGGGCCTTC GCGGCACGCT GTCCTCGCCG GTGACCGGCA TCGACGCCCT GGCCCAGGAA
GCGAGCGCAA ACTACGCCGT CTACGCCCCC GACCGCCTGC GCCCGGTTGA GCTCGCGGCC
AGCAACAGCG ACGAACTCGC CCGCTGGTTC TCCGCCCGGC TCGACCGACG CGTCGGCGTG
CCGGATCTGA GCGCCTCCGG CTACCGGCTG ATGGGCGGGC GCCTCGTCGC CACGCCGCAC
GGCCCGGCGG GGCTGCTGAT GTACGACGAC CCGCGCGGCA CACGGCTCGT CATGCTGATG
CGGCCCATGG CCCAGCCGGG CGACGCGCCG ATGCGCGAGC ACCGGGCAGG ATCGGCCACC
GGCTACGCCT GGGCCCAGGA CGGGCTCGGC TACAGCCTCG TCGGCGCGAG CGATCCTGCC
GTCCTGCATC CGCTCGCCAA TGAGATCCGC CGCACGACCG CGACGAACAC CTGA
 
Protein sequence
MTVRPITEDD IQAFVDERLE APRRAEVEAY LARHPELGRR VERMRGLGDA LRDAFAPVAA 
EPVPAQLNLA HLIEARRRPR LPAWQAAAAA VLLALGGIGG WGLRGTLSSP VTGIDALAQE
ASANYAVYAP DRLRPVELAA SNSDELARWF SARLDRRVGV PDLSASGYRL MGGRLVATPH
GPAGLLMYDD PRGTRLVMLM RPMAQPGDAP MREHRAGSAT GYAWAQDGLG YSLVGASDPA
VLHPLANEIR RTTATNT