Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_0298 |
Symbol | |
ID | 6308773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 317805 |
End bp | 318578 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 642649000 |
Product | putative transmembrane anti-sigma factor |
Protein accession | YP_001923015 |
Protein GI | 188579570 |
COG category | [K] Transcription |
COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGTGC GCCCGATCAC CGAGGACGAC ATCCAGGCCT TCGTCGACGA GCGCCTGGAG GCGCCGCGCA GGGCCGAGGT CGAGGCCTAC CTCGCTCGCC ATCCCGAACT CGGCCGACGC GTCGAGCGCA TGCGCGGGCT CGGCGACGCG TTGCGCGACG CCTTCGCGCC GGTGGCCGCC GAGCCGGTTC CGGCCCAGCT CAACCTCGCC CACCTCATCG AGGCGCGACG GCGCCCGCGT CTGCCCGCTT GGCAGGCCGC GGCGGCGGCC GTGCTGCTGG CCCTCGGAGG CATCGGCGGC TGGGGCCTTC GCGGCACGCT GTCCTCGCCG GTGACCGGCA TCGACGCCCT GGCCCAGGAA GCGAGCGCAA ACTACGCCGT CTACGCCCCC GACCGCCTGC GCCCGGTTGA GCTCGCGGCC AGCAACAGCG ACGAACTCGC CCGCTGGTTC TCCGCCCGGC TCGACCGACG CGTCGGCGTG CCGGATCTGA GCGCCTCCGG CTACCGGCTG ATGGGCGGGC GCCTCGTCGC CACGCCGCAC GGCCCGGCGG GGCTGCTGAT GTACGACGAC CCGCGCGGCA CACGGCTCGT CATGCTGATG CGGCCCATGG CCCAGCCGGG CGACGCGCCG ATGCGCGAGC ACCGGGCAGG ATCGGCCACC GGCTACGCCT GGGCCCAGGA CGGGCTCGGC TACAGCCTCG TCGGCGCGAG CGATCCTGCC GTCCTGCATC CGCTCGCCAA TGAGATCCGC CGCACGACCG CGACGAACAC CTGA
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Protein sequence | MTVRPITEDD IQAFVDERLE APRRAEVEAY LARHPELGRR VERMRGLGDA LRDAFAPVAA EPVPAQLNLA HLIEARRRPR LPAWQAAAAA VLLALGGIGG WGLRGTLSSP VTGIDALAQE ASANYAVYAP DRLRPVELAA SNSDELARWF SARLDRRVGV PDLSASGYRL MGGRLVATPH GPAGLLMYDD PRGTRLVMLM RPMAQPGDAP MREHRAGSAT GYAWAQDGLG YSLVGASDPA VLHPLANEIR RTTATNT
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