Gene Mpop_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0171 
Symbol 
ID6311901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp180179 
End bp182401 
Gene Length2223 bp 
Protein Length740 aa 
Translation table11 
GC content71% 
IMG OID642648878 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_001922895 
Protein GI188579450 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG5278] Predicted periplasmic ligand-binding sensor domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCT ACCTCGTCGC GCGCGCCAAC CTGCTGGTCT TCGGTGTGCT CGTTGTCATC 
CTCGCCCTGG TCGGCGTGCT GACCTGGGAG CGCCTGAACG AGTCGCGCGT CGCCCGCGAG
TGGTCCCAGC ACAGTTACCG CGTGCTCGGA ACCACCAAGG ACCTCGCCAT CGCCCTGCGC
GACGCCGAGC GCGGCCAGCG CGGCTACCTT CTCACCGGCC GGGACGAGTA CCTCGGACCC
TACAACGCCG CGCGCGACCG CATCAGCCTG CTCCAGGGCG AGCTCCAGAA GCTGACCGCC
GACAACGGCG CCCAGCAGGA GCGCCTGCGT GCGCTGGCGC CGCTCCTGCA GCACAAGTTG
GAGGAGCTCG CCCAGACCGT GCAGGCCCGT CGGGATTCCG GGCTGGAGAC GGCCCTGCGC
ATCGTCAACA CCGACACCGG CCGCAACGAC ATGCGCGAGG CGGAGAACGT GCTCGCCGCC
ATGCTCGGCG ACGAGCAGCG GCTGCTCGAC GTGCGCCTCG CCCAGAACGA CGCCCGCGCC
CGGTGGGTGC GCTGGCTCGT CATCGGCGGT TCGGCGCTCG CGGTCCTGAC CCTGCTCTGG
GCTGCGCGGC TCCTGAACCA GGCATGGTCG CGCTCCTTCA GGACCGAGGC CGAGCAACGC
GACCTGGCGC TCCGCCTGCG CACCACGCTG GACAGCCTCA GCCAGGGCGT CGCCGTGTTC
GGCCCGGACC GCAAGCTCGC GAGCTGGAAC GCGTGCTTCC AGGTGCTGCT CGACCTGCCG
AAGGCGATGC TCCGGCCAAG CACGACCTAC GCCGCCTTCG TCGAGCACTC GGCTGAGCCG
GGCCGCCCAG CGCTTGAGAC CGAGGACCAG ATCCGGCACG GCATCCGGAA CCCGCGTGAG
GCCGTCACCT ACGAGCGCGA ACGCGCGGAC GGCCACCACC TTGAGATCCG CCGTACGCCG
ATGCCGGACG GCGGATTCGT GCTGACCATC TCAGACATGA CCAAGCGCGC CCAGGCCGAG
GGCGTGCTGC GCGAGGCCCA AAAGATGCAG GCCATCGGGC AGCTCACCGG AGGCATCGCG
CACGACTTCA ACAACCTGCT GCAGGTCATC CTCGGGAACC TGGAGTTCGT ACGAGCCAAG
CTCGAAGGCG ACGCCAAGCT GCAGCAGCGG ATCGAGCGAG CGGCCTGGGC GGCCCAGCGC
GGGGCGACGC TGACCGCGCA GCTTCTTGCC TTCGCCCGCA AGCAACCGCT GGCACCCGCC
GCCATCGACC TGGCCGCGAC CATGCCGGAC CTGGTGCCGC TCCTGCGCCG CACCCTGGGC
GAGCACATCG AGGTGCGCTA CGTCGAGACC GCCGGCCTAT GGCCGGCCAT GGCCGACCCC
GCGCAGCTGG AGAGCGCCGT CCTGAACCTG GCGCTCAACG CGCGCGACGC GATGCCGGGC
GGCGGCCGTC TCACCATCGA GCTCGGTAAC AAGGTGCTCG ACGAGGAGTA CGCGCGGCAC
CATGCGGAGG TTGTGCCCGG CGACTACGCC ATGGTGGCGG TGTCCGACAC CGGCCACGGC
ATGACGACGG ATGTGGTCGC GCGCGTGTTC GAGCCGTTCT TCACGACCAA GCCCGACGGC
AAGGGCACGG GGCTCGGCCT CGCGATGGTG TTCGGCTTCG TCAAGCAGTC GGGCGGCCAC
GTGAAGATCT ACTCGGAGCC CGGCGAGGGC ACCACGGTGA AGCTCTACCT GCCGCGCGCG
GTCGGGGCGG CCACACCGTC GCAACGGACG GGCGCGCCCA TCGACCTGCC GCGCGGCACG
GGTACGGTGC TGGTGGTGGA GGACGAGGCG GCGGTGCGCG AGATCGCCTG TGCCATCCTC
GCCGACCTCG GCTACCGGGT ACTGGAGGCG GCCGACGGCG AGGAGGCGCT GCAGGTGTTC
GGCCAGAACA CGACCGCCAT CGACCTGCTG CTCACCGACG TGGTGCTGCC GGGCAAGGTG
CGTGGCCGAG AGCTCTCGGA GCGCGTGAGG GCGGTCCGGC CGGAGGTACG GGTGCTCTTC
ATGTCCGGGT ACACCGAGAA CTCCATCGTG CACCACGGCC GGCTCGACGA CGGGGTGCAG
CTCATCGGCA AGCCCTTCAA GCGCGAGCAG CTCGCCCGCA AGGTCGCCGA GGTGCTCGGC
GCTCCCGCCG AGACGAGGGG GCCCGGCAAG GTTGTGGAGC TCAGGCCGAG GCGCGACGCC
TAA
 
Protein sequence
MTRYLVARAN LLVFGVLVVI LALVGVLTWE RLNESRVARE WSQHSYRVLG TTKDLAIALR 
DAERGQRGYL LTGRDEYLGP YNAARDRISL LQGELQKLTA DNGAQQERLR ALAPLLQHKL
EELAQTVQAR RDSGLETALR IVNTDTGRND MREAENVLAA MLGDEQRLLD VRLAQNDARA
RWVRWLVIGG SALAVLTLLW AARLLNQAWS RSFRTEAEQR DLALRLRTTL DSLSQGVAVF
GPDRKLASWN ACFQVLLDLP KAMLRPSTTY AAFVEHSAEP GRPALETEDQ IRHGIRNPRE
AVTYERERAD GHHLEIRRTP MPDGGFVLTI SDMTKRAQAE GVLREAQKMQ AIGQLTGGIA
HDFNNLLQVI LGNLEFVRAK LEGDAKLQQR IERAAWAAQR GATLTAQLLA FARKQPLAPA
AIDLAATMPD LVPLLRRTLG EHIEVRYVET AGLWPAMADP AQLESAVLNL ALNARDAMPG
GGRLTIELGN KVLDEEYARH HAEVVPGDYA MVAVSDTGHG MTTDVVARVF EPFFTTKPDG
KGTGLGLAMV FGFVKQSGGH VKIYSEPGEG TTVKLYLPRA VGAATPSQRT GAPIDLPRGT
GTVLVVEDEA AVREIACAIL ADLGYRVLEA ADGEEALQVF GQNTTAIDLL LTDVVLPGKV
RGRELSERVR AVRPEVRVLF MSGYTENSIV HHGRLDDGVQ LIGKPFKREQ LARKVAEVLG
APAETRGPGK VVELRPRRDA