| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0134 |
|---|
| Symbol | |
|---|
| ID | 6311243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 134596 |
|---|
| End bp | 136644 |
|---|
| Gene Length | 2049 bp |
|---|
| Protein Length | 682 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 642648844 |
|---|
| Product | PAS/PAC sensor hybrid histidine kinase |
|---|
| Protein accession | YP_001922861 |
|---|
| Protein GI | 188579416 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.574481 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0374693 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGTTT CCATCGCGGA CGAGGAGCGC GTCCTCATCC TCGCGCCGCG CGGACGCGAC
GCCGCCGTCA CGGGGCAGGT GCTCGCCCAG GCGGGCACGG GGACCGAGCC GTGCCCGGAC
ATGGCGGCGT TGCTGGACGG GTTGGCTGCC GGCGCCGGCG CGGCGCTCGT CACCGAGGAG
GCGCTGGACG GCGACCTGGA TGCCCTGTTC GCTTGGCTGG ACGCTCAGCC GGCGTGGTCG
GACTTCCCCT TCATCGTGCT GGCGACGCGC CAGGCCGGGC GCCGCCCGGA GCGCGCCGCG
CGCCTGCTCG CACGGCTCGG CAACGTCGTC CTGCTGGAGC GCCCGGTGAA CGCCGAGACG
CTGGCGAGCG CCGCGGCCTC GGCCCTGCGG GCGCGCCGCC GCCAGTACCA GGCCCGCGAG
TACCTCCTGG AACGCGAGCG CGCCCAGGAG CAGCTCCGAC GCTCCAACGA GGACCTGGAG
CGGCGCGTGG CCGAGCGGAC GCGCGAGGTC GAGGCCGCTC ACGAGACCCT GGCCTTCGCG
CTCGACGCCG CCGGCATGGC CTCGTGGGAC CTCGACTACG TCACCGGAGT TTCGCGTCGC
TCGCCGCGCT ACGACGCCGT CTTCGGCTAC GCGGGTGAAG GGCCCGCCTG GGACCGGCAG
GTCCTCCTCG ACCACATCGT CGAGGAGGAC CGCGGCATCG CCGAGCGCGC TTTCGCGGCG
ACCTTGGAGA CCAACGCGCT CGACCTCGAA TGCCGCGTCC GGCGCGTCGA CGGGGCCATC
CGGTGGATCG CCCTGCAGGG CCGGATCAAG CGCGACGCCT CCGGCGCGCC CTTGCGCATC
GCCGGCATCC TGATGGATCG GAGCGACCAG CGGCTCACCG AGGAGGCGCT GCGCCAGGCC
CAGAAGATGG AGGCCATCGG TCAGTTGACC GGCGGCGTGG CGCACGACTT CAACAACCTG
CTCACCGTCA TCGTCGGCGG CCTCGACATG ATGCTGCGCC GGCCCGAGCA GGTCGACCGC
GTCAAGCGCC TGGCCGAGGC GGCCATGGGG GCGGCCCGTC GCGGCGAGCA GCTGACCCAG
CAGCTCCTGG CCTTCTCGCG CCGGCAGATG CTGCGGCCCC AGACCCTCAA CCCGAACCGG
CTGCTGCTCG ACTTCAAGCC GCTGGCCGAG CGCGCGGCGG GCGGGGCCGT CGAGCTCGCC
TTCGACCTCG ACCCGGCCCT CGATCCGATC CGCATCGACC CGGCGCAGTT CGAGGCGGCG
GTGCTGAACC TGATCGTGAA CGCGCGCGAC GCGATGGAGG GGCGGGACGG GCACGCCCGC
ATCGCAATGA CGAGCCGCAA CGCCCGCCTC GACACGGCGG CCGTCGCCGA CAGGGGCGTG
CCGCCCGGGC CCTACATCGT GGTCTCGGTG ACCGACACCG GGAGCGGCAT CCCGCCCGAC
AAGCTCCAGC GCGTGTTCGA GCCGTTCTTC ACCACCAAGG AAGTGGGCAA GGGCACCGGG
CTCGGATTGA GCCAGGTCTA CGGCTTCACG CGCAGCGCCG GAGGGTTCGC TCACATCGAT
TCCGTGGTCG GTGCAGGCAC GACGGTGAGC CTGTACTTCC CGCGCTCGGC CGACCCTGCG
GGCGAGGAGG TCGGCACGGG CCCGGCCGCG GCCATCCCGT TGCGCCGCGC CGGCGAGGGC
GAGACGGTGC TGCTGGTCGA GGACGACGAG CAGGTGCTCG CCATGGCGAC CGAGAGCCTG
GAGGAACTGC GCTACCGGGT CGTCGCCCGC AACGCCGCCG AGGCGCTGGG GCACCTCACG
GGTGTGGAGC GTATCGACAT CCTGTTCTCG GACGTGGTGA TGCCCGGCGG CATGAACGGG
TCGCAGCTCG CGGTCGAGGC GCAGCGGCTC CGGCCCGGCG TCAAGGTGCT GCTCACCTCG
GGCTACGTGG CCAACCTCGA CGAGGGGCAG GTCATCGGGC GCGGCGAGCT CCCGGTGCTC
AACAAGCCCT ACCGCCGCGA CGAGCTCGCT CGCTCGCTGC GGCTGGTGCT CGGGGGTGGG
GAGCGCTGA
|
|---|
| Protein sequence | MSVSIADEER VLILAPRGRD AAVTGQVLAQ AGTGTEPCPD MAALLDGLAA GAGAALVTEE
ALDGDLDALF AWLDAQPAWS DFPFIVLATR QAGRRPERAA RLLARLGNVV LLERPVNAET
LASAAASALR ARRRQYQARE YLLERERAQE QLRRSNEDLE RRVAERTREV EAAHETLAFA
LDAAGMASWD LDYVTGVSRR SPRYDAVFGY AGEGPAWDRQ VLLDHIVEED RGIAERAFAA
TLETNALDLE CRVRRVDGAI RWIALQGRIK RDASGAPLRI AGILMDRSDQ RLTEEALRQA
QKMEAIGQLT GGVAHDFNNL LTVIVGGLDM MLRRPEQVDR VKRLAEAAMG AARRGEQLTQ
QLLAFSRRQM LRPQTLNPNR LLLDFKPLAE RAAGGAVELA FDLDPALDPI RIDPAQFEAA
VLNLIVNARD AMEGRDGHAR IAMTSRNARL DTAAVADRGV PPGPYIVVSV TDTGSGIPPD
KLQRVFEPFF TTKEVGKGTG LGLSQVYGFT RSAGGFAHID SVVGAGTTVS LYFPRSADPA
GEEVGTGPAA AIPLRRAGEG ETVLLVEDDE QVLAMATESL EELRYRVVAR NAAEALGHLT
GVERIDILFS DVVMPGGMNG SQLAVEAQRL RPGVKVLLTS GYVANLDEGQ VIGRGELPVL
NKPYRRDELA RSLRLVLGGG ER
|
|---|
| |