Gene Mpop_0064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0064 
Symbol 
ID6310447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp68909 
End bp70000 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content64% 
IMG OID642648777 
Producthypothetical protein 
Protein accessionYP_001922795 
Protein GI188579350 
COG category[R] General function prediction only 
COG ID[COG2358] TRAP-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.257348 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATGCG CGAGCGACCC AGTTGCGGGC GCGCCAGACT CCGCACCAGT TGAAACCGGC 
CCCGCCACGG AAGCCGCGCT CGGCGAGCGC ATGAACGCCA ACACCGTCAC GGTGGTGACC
GGTACGCCCG GCGGAACCTA CTTCCGCGTC GGTGCCGAGT TCGCCTTCGT ACTGGATGAC
GGCGATCGCC TACGGATCCT GCCGATCCTC GGCAAGGGGG CGGGCGAGAA CGCCTACGAC
ATCCGTTTCC TGAAGGGCGT CGATCTGGGT TTCGTTCGCA CCGATACCCT GGATCAGTTG
CGGCAAGACA AACGCCTGAA GAATATCGAA CAGCAGATCC ATTACATCGC CAAGCTGTTC
AACGATGAGA TGCATATCAT CGCGCCGAAA TCGGTCCGGA CCATCAGCGA TCTCGCCGGC
AAGCGGATCA GCTTCGACGT CAAGGGCAGC GGCACCGATT ACAGCGGCCG GGCCATGTTC
CGCGAACTCG GCGTCGCCGT GGAGGGGATC AACGTCGATC AGCCCGCCGC CCTCGAGATG
CTGCGCAACG GCGAGATCGA GGCTGTCGTG TCGGTGGCGG CAAAGCCGGT GGCTTTCATC
GCGAGCTTCG ATCCGGGTGA ACGCTTCCAC TTCGTGGCGG CGCCGTACCC GGACACGATG
AACGAAGCCT ATGTCCCGGC GACCCTGACA CGGAACGATT ATCCGAAGTT TGTCGGCGAC
GAGGCGGTGG AGACGGTCGC GGTCGGCACG GTCCTCGGGG TCTACAACAG TCCGAAGGGG
TCTCCGCGCT ATGAGAAGCT CGTCCGCTTC GTCGACGCCT TCTTCGGCAA GTTCGACAAG
TTCCTGGCTC CGCCGCGGCA CCCGAAATGG CGGGAGGTCA ACCTCGCGGC CTCGGTGAAG
GGCTGGCGGC GCTTCCGACC GGCGCAGGAA TGGCTCGACC GCCACAAGGA GCAGGAGGCC
GAGGCCCAGC CGGATCTGGA CCGGTTCTTC CAGTCACAAC CCCAGCGACC GGCCGGGAAG
GATGAGATCT ACCAGGCCTA TCTGAAGTGG CGGCAAGAGC GGCCATCACT GCGATCGACT
CTCCCCCATT GA
 
Protein sequence
MACASDPVAG APDSAPVETG PATEAALGER MNANTVTVVT GTPGGTYFRV GAEFAFVLDD 
GDRLRILPIL GKGAGENAYD IRFLKGVDLG FVRTDTLDQL RQDKRLKNIE QQIHYIAKLF
NDEMHIIAPK SVRTISDLAG KRISFDVKGS GTDYSGRAMF RELGVAVEGI NVDQPAALEM
LRNGEIEAVV SVAAKPVAFI ASFDPGERFH FVAAPYPDTM NEAYVPATLT RNDYPKFVGD
EAVETVAVGT VLGVYNSPKG SPRYEKLVRF VDAFFGKFDK FLAPPRHPKW REVNLAASVK
GWRRFRPAQE WLDRHKEQEA EAQPDLDRFF QSQPQRPAGK DEIYQAYLKW RQERPSLRST
LPH