| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0049 |
|---|
| Symbol | |
|---|
| ID | 6310739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 53514 |
|---|
| End bp | 54230 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 642648762 |
|---|
| Product | malonate decarboxylase, gamma subunit |
|---|
| Protein accession | YP_001922780 |
|---|
| Protein GI | 188579335 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03134] malonate decarboxylase, gamma subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.210818 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0466048 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTCG CTGAGATCCT CGCTGCGCTG TTTCCCGAGG GCCATTCCGT CACCGTCACG
GACGGTCTCG TCAGCGGCGA GGGCCCGTTC CGGGGCGGCC GGCTCGCGGT GATCGGCATC
GACGGCGACA CGGCGCTCGG CGTCGACGGC GCCTGCCGCC TCGCGCGCGA TGTCCTCGAC
GTGGTGCGTC GGGGCGATCG AACGCCGATC CTCGTGGCGA TCGATTCCGA CAGCCAGCGC
ATGAGCCGGC GCGACGAGTT GCTTGGCCTC AACGAATATC TCGCCCACCT CGCCAAGACG
CTGCTGCTCG CCGATGCGAA GGGCCATCCC ACGATCGGCC TGATCTACGG CCACTCGGCG
GCGGGCGCCT TCATCGCCAC GGCGCTGGCA ACGCGCGTCC TCGTCGGCCT GCCGGGGGCG
AACCCCAGTG TGATGGACCT GCCGTCGGTC GCCCGCGTCA CCAAGCTGCC GCTCGACCGG
CTCGAGGCGA TGGCCAAGGA CACGCCGGTC TTCGCGCCGG GCCTCGACAA CATGGTGCGC
ACCGGTGCGG TGCAGGCGGT GCTCGACCCC AACCGGCCGC TCGCAGAGCA GATCGCCGCC
GTGATCGACG CGCTCCCGGC GGACGATATC CGCGATCAGG CCGGACGCGC GCGCGGCGGA
CGCCCCGTCG CGGAGGAGAT CGCAGCGCAG GTGGTGCGGG ACGCGCGCCT TGGCTGA
|
|---|
| Protein sequence | MTLAEILAAL FPEGHSVTVT DGLVSGEGPF RGGRLAVIGI DGDTALGVDG ACRLARDVLD
VVRRGDRTPI LVAIDSDSQR MSRRDELLGL NEYLAHLAKT LLLADAKGHP TIGLIYGHSA
AGAFIATALA TRVLVGLPGA NPSVMDLPSV ARVTKLPLDR LEAMAKDTPV FAPGLDNMVR
TGAVQAVLDP NRPLAEQIAA VIDALPADDI RDQAGRARGG RPVAEEIAAQ VVRDARLG
|
|---|
| |