Gene Mpop_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0043 
Symbol 
ID6311138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp48445 
End bp49140 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content71% 
IMG OID642648756 
Producttranscriptional regulator, GntR family 
Protein accessionYP_001922774 
Protein GI188579329 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0169991 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGTG TGGGCGACGG TGGCGACAGG GACGGCACGC CGGAGGGGCG CGGCCTTCTC 
TCCGATCAGA TCCGCAACGC ACTGACGGAC GAGATCGCCG CCGGCGTCCT CGCCGCGGGC
ATCGCCCTCG ACGAGCAGGA TCTCGCCGAC CGCTTCGGCG CTTCGCGCAC CCCCGTCCGC
GAAGCCCTGC GCCAGCTCGC GGCCAACGGC CTCGTCGAGA TGCGGCCCCG GCGCGGGGTC
GTCGTCGCCC GCACGACGCC CGAACGGATC ATGGAGATGT TCGAGACGAC CGCCGAATTC
GAGGCCCTTT GCGTCCGGCT CGCGACCTAC CGGATGACGC CGCTCGAACT CAGCGCCTTG
ATGGACCTTC ACGAGCAATC GGCGGTGCCG GTCGCGGCGC AGGACTACGA TACCTACGAC
GCCCTCAACC GCGCCTTCCA CGAGGCTCTG TACCGCGCGA CCCATAACGG CTTCATGGCC
GAGCAGGCGC TGGCGATCCG CTCCCGCCTC TCGGCCTTTC GCCGGACGCA GTTGCGCCAG
GGCGAGCGCA TCCTGCGCTC GCGTGCCGAG CACGGCGAGA TCCTCCAGGC GATCGCCGAA
GGCGACGGCG ACATCGCGGC GCGTCGGATG CGCGCGCACA TGCTCAATGC CGCGAGCGCG
CTCGGCCGCT ACGTCGCGGA CCATGCCAGC ACGTGA
 
Protein sequence
MMRVGDGGDR DGTPEGRGLL SDQIRNALTD EIAAGVLAAG IALDEQDLAD RFGASRTPVR 
EALRQLAANG LVEMRPRRGV VVARTTPERI MEMFETTAEF EALCVRLATY RMTPLELSAL
MDLHEQSAVP VAAQDYDTYD ALNRAFHEAL YRATHNGFMA EQALAIRSRL SAFRRTQLRQ
GERILRSRAE HGEILQAIAE GDGDIAARRM RAHMLNAASA LGRYVADHAS T