| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0029 |
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| Symbol | |
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| ID | 6311913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 31484 |
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| End bp | 32314 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642648742 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_001922760 |
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| Protein GI | 188579315 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.240678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.132165 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGTCTC AGGCGCGCGC CGATCTCCGC GCCCGGATGC CGGTGCTGGA TCTGACCGCG
ACGATGCAGG TTGCAAGCGC GATCGAGCCG ACTGGCCCCG GCGGCGTGGC GATCGTCGAG
AGGATCGAGC CCGCCATTCC GCTTATGCGC CCGGCAACGG TTCCGGTCTC CGCGATCTCG
ACCCTGATCG ATCAGGCCGC TGCCAGCACC GGGGTTCCGG CCGACTTTCT GCTGCGGTTG
CTGAAGCGCG AGAGCGGGCT CAATCCGGTC GCCGTGAGCC CGAAGGGGGC GCTCGGTATC
GCCCAGTTCA TGCCTGCCAC GGCGGCCGAG CGCGGCCTCG GCGATCCGTT CGATCCCTTC
CAGGCGATTC CGAAGGCGGC CGAGCTTCTG CGGGATCTGC GGCTCCGTTA CGGCAACTGG
GCCCTGGCGG CCGCCGCCTA CAATGCCGGG CCCGGCCGGG TCGATGCGTG GCTGCTCGGC
CGTCTGGAAC TGCCGCGGGA GACGGTGGAC TACGTCGCCA GCATCACCGG CGTGAACACG
GCGGCTTACC GCCCGGCCGG AAGCGGCTGG CCGCTCCAAA CCGCATCCTT CACCACGTCC
CTCTCCCTGT TCGGCGGCAC GCCCGATCTG GCCACGACCC GGATCTCGAC GCGCCCGGAG
GCTCCGGCCG AGGGGAAGAA GACGGGGCGG GCAACGGACG GCGCCAAGGC ACCGTTATCG
ACGGCGCAAC TCCGTGCCGC GGCCGGCGGC GCCCTGAGGG TCGGGGTGGG AGGACCCTGC
GCCGCCCTGC TCAGCCCGGC CGCGCCCTGC CTGAACTATA GCCGGTACTG A
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| Protein sequence | MGSQARADLR ARMPVLDLTA TMQVASAIEP TGPGGVAIVE RIEPAIPLMR PATVPVSAIS
TLIDQAAAST GVPADFLLRL LKRESGLNPV AVSPKGALGI AQFMPATAAE RGLGDPFDPF
QAIPKAAELL RDLRLRYGNW ALAAAAYNAG PGRVDAWLLG RLELPRETVD YVASITGVNT
AAYRPAGSGW PLQTASFTTS LSLFGGTPDL ATTRISTRPE APAEGKKTGR ATDGAKAPLS
TAQLRAAAGG ALRVGVGGPC AALLSPAAPC LNYSRY
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