Gene Mpop_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0005 
Symbol 
ID6309000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5168 
End bp5779 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content65% 
IMG OID642648718 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_001922736 
Protein GI188579291 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.610199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.647138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTGT CGAGCCTCGC GCTATTCGCT GGCGTCTACG CCGTTGCGGT TGCCTCACCG 
GGGCCAGGCA TTTTCGCCCT CGTCGCTCGC GTGCTGGCGC GTGGAACCCG CGGCGTCCCT
GCCTTCATCG CGGGGTTTCT CGTCGGCGAC CTACTCTGGT TCTCGATCGC AGCGACCGGA
TTCGCCCTGC TTGCCCAGAG CTTCGCAGCC CTCTTTATCG GCATCCGATA CCTCGGCGCA
GCCTATCTCG CCTACCTTGC GTGGCGGGCG TGGACGGCGC CGGTCGAGCC CATATCGGGT
GAGCCAGTGC AAGGCGAGAG CGGCCTTCGA CTCTTCCTTG GGGGTTTGGC GTTGACGCTC
GGCAATCCGA AGGTCGTCTT GTTCTTCCTT GCGCTGCTGC CGACCGTGAT CGATCTCGAG
CATCTCACGC CGCTTGGAAT GATCGAGATT GCTGCGACCA TCGCCGCCGT TCTTTGCACG
ACGCTAACCG TCTATGCCGT TGCCGCAGTC CGGGTTCGAC GTCTCTTCGT TTCGGTCGGC
GCACGGCGGG CAGTCAATCG TGGGGCTGGC ACGGTGATGG CTGGAGCAGC CGTCGCCGTC
GCGATGCGGT GA
 
Protein sequence
MPLSSLALFA GVYAVAVASP GPGIFALVAR VLARGTRGVP AFIAGFLVGD LLWFSIAATG 
FALLAQSFAA LFIGIRYLGA AYLAYLAWRA WTAPVEPISG EPVQGESGLR LFLGGLALTL
GNPKVVLFFL ALLPTVIDLE HLTPLGMIEI AATIAAVLCT TLTVYAVAAV RVRRLFVSVG
ARRAVNRGAG TVMAGAAVAV AMR