Gene Nther_2872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2872 
Symbol 
ID6316330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp3103797 
End bp3104870 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content38% 
IMG OID642645243 
Productpeptide chain release factor 1 (bRF-1) 
Protein accessionYP_001919007 
Protein GI188587462 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000416881 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.000000000305481 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTAGATA AATTAGAAGG TATAGAAAAA CGATATCAGG AACTGGAAGA TTTAATGTCA 
GATCCTGAAG TTATAAATGA CCCTGAAAAG TTAAAACAAT ATTCTAAAGA ACATGCATCT
CTTGAGGAAA TCGTTAATAA ATATCGACAA TATCTTGAAA CAAAACAAGA ATTTGAAGAG
GCTAAGGAAA TGCTAGAAGA AAATGATGAA GATCCGGATA TGGAAGAATT TTTAAAGGAT
GAAATTCCTC GACTGGAAAA TCAAATGCAA GAGATCTATG ACTCTCTTAA AATTCTGTTA
TTGCCCAAAG ATCCCAATGA TGAAAAGAAC GTAATTGTTG AAATTAGAGC CGGAGCGGGT
GGTGATGAAG CAGCTTTATT TGCTGCGGAT CTGTATCGTA TGTATACCCG CTATGCTGAG
ATAATGAACT GGAAAACAGA AATAATGGAT AGTCATGAGA AAGATATGGG TGGCTTTAAA
GAGATTGTTT TCATGATAGA AGGTAAAAAT GCTTATTCGC GTCTAAAATT TGAAAGTGGT
GTCCACAGGG TACAGCGAGT GCCCTCTACC GAATCTTCTG GTAGGATTCA CACTTCAACT
GCTACTGTTG CTGTATTGCC TGAAGCGGAA GATGTAGAAA TTGAAATTGA TACCAATGAA
CTCAGAATAG ATACATTTTG TGCTACAGGA CCAGGAGGGC AAAGTGTTAA TACCACACAA
TCGGCAGTTA GAATCACCCA TGAACCAACT GGAGTTGTTG TTAGTTGCCA GGATGAGAAA
TCTCAGCATA AGAATCGAGA TAAAGCCATG AAAGTATTGC GAGCTAGAAT ATATGATATG
TATCTGGAGG AACAACAACA GCAAGAGGCA GAAGAACGAA AAAGTCAGGT GGGAAGTGGC
GATAGGAGCG AAAGAATAAG AACTTACAAC TTTCCCCAGG GGCGAATTAC CGATCACAGG
ATAAACTTCA CAACTCATAG ACTGGAACAA GTGTTAGAAG GCGAAATCGA TGAATTAATT
GATGCTTTAA TAACTACAGA ACAAGCTGAA CAATTGAAAA AAATGGGAGC CTAA
 
Protein sequence
MLDKLEGIEK RYQELEDLMS DPEVINDPEK LKQYSKEHAS LEEIVNKYRQ YLETKQEFEE 
AKEMLEENDE DPDMEEFLKD EIPRLENQMQ EIYDSLKILL LPKDPNDEKN VIVEIRAGAG
GDEAALFAAD LYRMYTRYAE IMNWKTEIMD SHEKDMGGFK EIVFMIEGKN AYSRLKFESG
VHRVQRVPST ESSGRIHTST ATVAVLPEAE DVEIEIDTNE LRIDTFCATG PGGQSVNTTQ
SAVRITHEPT GVVVSCQDEK SQHKNRDKAM KVLRARIYDM YLEEQQQQEA EERKSQVGSG
DRSERIRTYN FPQGRITDHR INFTTHRLEQ VLEGEIDELI DALITTEQAE QLKKMGA