Gene Nther_2870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2870 
Symbol 
ID6316328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp3101713 
End bp3102534 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content38% 
IMG OID642645241 
Productsporulation sigma factor SigG 
Protein accessionYP_001919005 
Protein GI188587460 
COG category[K] Transcription 
COG ID[COG1191] DNA-directed RNA polymerase specialized sigma subunit 
TIGRFAM ID[TIGR02850] RNA polymerase sigma-G factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000515832 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0000000000171975 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGTTAC AAAGAGTTAC TCTGAGCGGT ATAAATACAT ACAAATTACC AGTTATTTCA 
TCTGAAGAAA CTCAAAAACT TTTTGAGAGG TTAGAGCAGG GAGATGAACA AGCCAAACAA
GAGTTAATTA ACGGTAATTT GCGACTGGTA TTGAGCGTGA TTAATAAGTT TAAAAATCGG
GGAGAAAACC TGGACGACTT ATTTCAAGTA GGTTGTTTAG GTTTAGTTAA AGCCGTGGAT
AATTTTGACC CCAAACAAGG TGTTAAATTT TCTACTTATG CTGTTCCTAT GATTATGGGA
GAAATAAAAA GATATCTAAG AGACGATAGT CCCATGAGAG TCAGTAGAAG TTTGAAATTG
CTTGGTCAAG AGGCGGCGAA AGCCAAAGAA AAGCTGCGAA AGGAAAAACC TTATGAACCT
ACAATAGAAG AACTTGCCAG TGAATTGAAT ATTAGCCGAG AAGAGCTTGT GGAGGCTTTG
AACTCTTCTT CTGAACCTTT AAGTTTATAT GATCCCGTTT ATTCGGATAG CACAGACCCC
GTGCTGTTGG TAGATCAAAT TAAAGACGAA GAAGAACGAC TTGAAAACTG GGTCGAAAAT
ATGACTTTAA AAGAAGCCAT TGCTAAGCTT CCGGAGAGAC AAAGGAATAT TGTCAACCGC
AGATTTTTTA AAGGACAAAC CCAGGTAGAA GTTTCAGATG AGTTAAATAT TTCTCAGGCC
CAGGTTTCTC GTTTGGAGAA ATCAGCTTTA TTACAGTTGA GAAAACTAGT TAAAGAAGAA
GTGGCAGCTA ATCGGGAGGG GAGGTCGAAT CAAGATGATT AA
 
Protein sequence
MKLQRVTLSG INTYKLPVIS SEETQKLFER LEQGDEQAKQ ELINGNLRLV LSVINKFKNR 
GENLDDLFQV GCLGLVKAVD NFDPKQGVKF STYAVPMIMG EIKRYLRDDS PMRVSRSLKL
LGQEAAKAKE KLRKEKPYEP TIEELASELN ISREELVEAL NSSSEPLSLY DPVYSDSTDP
VLLVDQIKDE EERLENWVEN MTLKEAIAKL PERQRNIVNR RFFKGQTQVE VSDELNISQA
QVSRLEKSAL LQLRKLVKEE VAANREGRSN QDD