Gene Nther_2846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2846 
Symbol 
ID6316461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp3079949 
End bp3081475 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content43% 
IMG OID642645217 
ProductATP synthase F1, alpha subunit 
Protein accessionYP_001918981 
Protein GI188587436 
COG category[C] Energy production and conversion 
COG ID[COG0056] F0F1-type ATP synthase, alpha subunit 
TIGRFAM ID[TIGR00962] proton translocating ATP synthase, F1 alpha subunit 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.525611 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATTC GTCCTGATGA AATTAGTACG GTGTTAAAAG ATAAAATTGC AAATTATGAG 
TCTCAAGTAG ACGTTTATGA AGTGGGCACC GTGCTTTACA TCGGGGATGG TATCGCCAGG
GTCCACGGAC TAGAAAATGT TATGGCTAAC GAGTTGGTCG AGTTTCCAGG CGAAATTTAC
GGGATGGCTC TGAACTTGGA AGAGGACAAT GTAGGTTGTG TTTTATTAGG TGAATACAGC
CACATTAAAG AAGGTGACCA AGTTAAACGA ACTGGCCGTA TTATTGAGGT ACCTGTTGGT
GACGACCTGG TAGGCAGAGT TGTTAACCCC GTTGGTGAAC CGAGAGATGG AAAGGGGCCA
ATTGAAGCAA CAGACTTCAG GCCTGTAGAA ACTCGTGCTC CGGGAGTTAT TGACAGGAAG
CCCGTTGAAG AACCCCTACA AACAGGGTTG AAAGCTATTG ACTCTATGAT TCCTATTGGT
CGTGGTCAGA GAGAGCTGAT CATAGGTGAT AGGGGAACGG GTAAGAGTGC TATTGGAATT
GATACCATCC TAAATCAGAA AGATTCCGAT GTATATTGCA TTTATGTGGC CATAGGACAG
AAAAAGTCTA CTGTTGCCCA GGTTGTTGAT GTCCTCGAAC GACATGGAGC TATGGATTAT
ACCACGGTGG TAGCTGCTAC AGCTGATGAA CCAGCACCAC TACTATATCT TGCACCCTAT
GCTGGTTGCA GTATGGGTGA AAAGTTTATG CACGAAGGGA AGCATGTATT AGTTGTGTAT
GATGATCTTT CTAAACATGC TGCCAGTTAT AGGGAACTGT CCTTGCTACT AAGACGACCA
CCAGGCAGGG AAGCTTATCC TGGGGATATA TTTTACCTCC ACTCTCGTCT GTTAGAGCGT
GCTGCTAAAC TGAATGATGA GAATGGTGGC GGCTCCTTGA CAGCACTTCC AATTATAGAA
ACCCAAGCTG GTGACGTGTC AGCTTACATC CCAACAAACG TTATTTCAAT TACAGACGGT
CAGATTTATC TGATCAGTGA TCTATTCCAC GCAGGGCAGC GACCTGCAGT TGATGTCGGT
ATCTCTGTTT CAAGAGTTGG TGGTTCAGCA CAGCTGAAAG GAATGAAACA AGTTTCAGGG
ACATTACGTT TGGACTTAGC TCAGTACAGG GAGCTAGAAG CTTTTGCCCA GTTTGGAACT
GATTTGGATA AATCCACACA ACAAAAACTT GCGCGCGGAA AGAGAACCTT TGAAATACTA
AAACAAGATC AGTATCAGCC GATGCCCGTA GCGGATCAGA TAGTTATCAT ATTCTGTGCT
ACCCACGGTT TATTAGACGA TCTAGAAGTT GAGCAAATCA AAGAGTTTGA GAAGTTCTTA
TTGAGCTATG TAAAAGATAA TGAACCAGGA ATTTACCAGC AGGTGGAAAC TGGTGAGAAA
ATATCCGATG AACTTGAAGA CCAGTTAAAA GAAGTTATAA ATAAAGCTAA AGAACAATTT
AAAGAAGAAA AAGAACTAAC CGGTTAA
 
Protein sequence
MSIRPDEIST VLKDKIANYE SQVDVYEVGT VLYIGDGIAR VHGLENVMAN ELVEFPGEIY 
GMALNLEEDN VGCVLLGEYS HIKEGDQVKR TGRIIEVPVG DDLVGRVVNP VGEPRDGKGP
IEATDFRPVE TRAPGVIDRK PVEEPLQTGL KAIDSMIPIG RGQRELIIGD RGTGKSAIGI
DTILNQKDSD VYCIYVAIGQ KKSTVAQVVD VLERHGAMDY TTVVAATADE PAPLLYLAPY
AGCSMGEKFM HEGKHVLVVY DDLSKHAASY RELSLLLRRP PGREAYPGDI FYLHSRLLER
AAKLNDENGG GSLTALPIIE TQAGDVSAYI PTNVISITDG QIYLISDLFH AGQRPAVDVG
ISVSRVGGSA QLKGMKQVSG TLRLDLAQYR ELEAFAQFGT DLDKSTQQKL ARGKRTFEIL
KQDQYQPMPV ADQIVIIFCA THGLLDDLEV EQIKEFEKFL LSYVKDNEPG IYQQVETGEK
ISDELEDQLK EVINKAKEQF KEEKELTG