| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_2761 |
|---|
| Symbol | |
|---|
| ID | 6315746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | - |
|---|
| Start bp | 2981803 |
|---|
| End bp | 2982636 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 642645134 |
|---|
| Product | orotidine 5'-phosphate decarboxylase |
|---|
| Protein accession | YP_001918899 |
|---|
| Protein GI | 188587354 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
|---|
| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 89 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATAG AAATCAGTAC TGAATCTGGA GGGATCTGGT ATATGAAGGA TAAAGGAGAT
AATAATCGAA ATGATCAGCC AGCAAGGGAA AAGTCAACTG ACCTAGAGGA TAAATTGATT
GTAGCCCTGG ATATGCCTGA CCGAACACAA GCCCTTTCCC TGGTTGATGA GTTGGGAGAA
CAAATTAAGT GGTATAAAAT CGGTTTAGAG TTATTTTGTT CCCAGGGACC AGAAATCATA
TCTGAATTGG TGGATAGAGA TAAAAAAGTA TTTTTGGATT TAAAACTTCA CGATATTCCC
AATACTGTTT CCAGAACAGC TAAAGAATTA GTACGAAGAG GCGCATCTAT GATAAATGTT
CATACAGCGG GCGGTAAGGA CATGATGGCT AGAACTGTGG AAGAGGTACA CACAGAGGCA
AGTGGTAGAG GAATCACACC ACCTAAAATA GTTGGTGTGA CGGTATTGAC TAGTTTGGGA
CAGAATGAAT TTAATAATCA ATTGGGGTTT AATGGTCACA TAGAAGATAA AGTTGTCGAA
TGGGCTCAAA TGGCCCGAAA TAGTGGGTTA GATGGAGTGG TAGCTTCAGC TAAAGAAGCA
GCCCAGATCA AAGAAAAGTT GGGAGCAGAG TTTTTAATAG TTACACCGGG AATTCGGTTG
GCTTCTGATG ATAAAAGTGA CCAAAAACGG GTGTTGACTC CAGATAAGGC TTTAAATAAA
GGTGCTACCC ATATAGTGGT AGGACGATCA ATTACTGGCA AAGAAGGGCC AGGGCAAAAG
AAAACAGCGG TTCAAGAGAT ATATAACTGT ATGAGGAGTG AGCAAAATGA CTAA
|
|---|
| Protein sequence | MEIEISTESG GIWYMKDKGD NNRNDQPARE KSTDLEDKLI VALDMPDRTQ ALSLVDELGE
QIKWYKIGLE LFCSQGPEII SELVDRDKKV FLDLKLHDIP NTVSRTAKEL VRRGASMINV
HTAGGKDMMA RTVEEVHTEA SGRGITPPKI VGVTVLTSLG QNEFNNQLGF NGHIEDKVVE
WAQMARNSGL DGVVASAKEA AQIKEKLGAE FLIVTPGIRL ASDDKSDQKR VLTPDKALNK
GATHIVVGRS ITGKEGPGQK KTAVQEIYNC MRSEQND
|
|---|
| |