Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_2667 |
Symbol | |
ID | 6317025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 2872332 |
End bp | 2873771 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642645045 |
Product | fumarase |
Protein accession | YP_001918810 |
Protein GI | 188587265 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1027] Aspartate ammonia-lyase |
TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.284725 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATAGCG AAGATGTGAA AGAAATAACA AGAGTAGAGT GCGATTCTTT AGGGTCAAAA GAAATACCTA AAGATGCCTA CTATGGGATT CAGTCAAAAA GAGCCCAAGA AAATTTTCCG TTATCTGGAT ATAGAGTACA TCCAGAACTG ATTAAAGCAA TGGGTAAAGT GAAGTATGCA TCTGTTGTAG CCAATATGAA AACAGGAAAA ATGCCCAACA AATCAGGAGA GGCTATTAAA CAGGCTTGTG AAGAAATGAG TTCAGGTAAA TTTTTCGATG CTATTGTGGT TGAGGCAATT CAAGGTGGTG CTGGCACATC AATAAATATG AACGTAAACG AAATTCTCGC TAATCGCGCT ATTGAAATAT TAGGCCATGA AAAGGGTGAT TACGACGTAG TTTCACCTAA CACTCATGTA AATATGTCCC AATCCACCAA TGATGTAGTA CCTACATCAT TTAAATTGGC TGTTATTACT ATGCGTGAAG ATCTTATCAG TAAGCTAGAA AATTTATATC AAACATTGTC CAAGAAAGAA CAAGAATTTG ATAAAGTTAT CAAGACGGGT AGAACCCATC TTCAGGATGC AGTTCCCATC CGACTTGGAC AAGAGTTCGG AGCTTATGCC AGGTTTGTAA AACGCGATAT TGAACGGATT TCTAATTCAA TAGAAGCTCT CAAAACAGTA AATTTAGGTG CTACAGCTGT TGGTACTGGT TTAAATGCCG ACTCTAAATA CATTAATACT GCTATAGAAG AATTAAGGGA AATCACTGGT ATAGATCTAG AAATCAGTGA TCATCTAGTT GATGCAACAC AAAATACAGA TGCCTATGTT CATGTATCCG GTGCTTTAAA AACAGCAGCT CTTAACATGT CCAAAATGGC CAATGATTTG CGCTTGATGT CTTCAGGTCC GAGATGTGGC TTTAAGGAGA TTAAGCTGCC AGCTGTTCAG CCAGGTTCTT CAATTATGCC TGGTAAGGTG AATCCCGTAA TTCCAGAAGT TATCAATCAA ATCTGCTTCC AGGTAGCAGG AAATGACCAT ACTATTTCAA TGGCTTCAGA AGCAGGTCAA TTGGAACTTA ATGTGATGGG CCCGGTTTTA TTTAGGAATA TGTTTGAATC CATGGAGATA ATAGCCAATG GAGCTCATAT ACTGTCTGAA AAATGTATTA AAGGCATTGA GCCCAATCAT GATAGATGTA ATGAGTTAGT TGAAAATAGT ATTGGAATTA TTACAGCCTT AAATCCTCAT ATAGGATATG AAACGGCTTC CGAAATTGCC AAGGAAGTTT TAGAAACCGG TCGTAGTGTA CGAGATGTCA TTCTAGAACG AGAAATCCTA ACAGAGGAAG AAATTGAAGA CATTCTAGAT CCCAAGGAAA TGACTGAACC AGGTATTGCT GGAAAAAAGA AAAATGACGT TACTGCTTAA
|
Protein sequence | MNSEDVKEIT RVECDSLGSK EIPKDAYYGI QSKRAQENFP LSGYRVHPEL IKAMGKVKYA SVVANMKTGK MPNKSGEAIK QACEEMSSGK FFDAIVVEAI QGGAGTSINM NVNEILANRA IEILGHEKGD YDVVSPNTHV NMSQSTNDVV PTSFKLAVIT MREDLISKLE NLYQTLSKKE QEFDKVIKTG RTHLQDAVPI RLGQEFGAYA RFVKRDIERI SNSIEALKTV NLGATAVGTG LNADSKYINT AIEELREITG IDLEISDHLV DATQNTDAYV HVSGALKTAA LNMSKMANDL RLMSSGPRCG FKEIKLPAVQ PGSSIMPGKV NPVIPEVINQ ICFQVAGNDH TISMASEAGQ LELNVMGPVL FRNMFESMEI IANGAHILSE KCIKGIEPNH DRCNELVENS IGIITALNPH IGYETASEIA KEVLETGRSV RDVILEREIL TEEEIEDILD PKEMTEPGIA GKKKNDVTA
|
| |