Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_2575 |
Symbol | |
ID | 6317036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 2764108 |
End bp | 2764698 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642644956 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_001918721 |
Protein GI | 188587176 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.230257 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 85 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATATA CTAGTAGAGA ACTAAAAGCC AAAAAAAATA AGAAAAAAAT TTTCGTTACT GCAATTGATT TAATAAGAAA AAAAGGTTAT GACAATGTAT CAATAAATGA AATTTGCTCC TTGTCAGGAT TTACTAAAGG GGCTTTTTAT CATTACTTTA ACTCAAAAGA AGACTTATTA ATCCAATTGC TCAGAGATGT AGATGACTAC TATACTGTGG AGGTATTACC TAAACTCGAT GGAATGTCAT CTACTGAAAA GTTAACTTAT TTTATGCAAC AATTTGCGTA TTGTGGTTAT GGAGTAGGTG TTGATATAAT AAATAACCTG TTTAAGAGCC AAACAAAGGT TTTGAATGAT TTTATGAACG ATTATGATAG ACCTTTTTTC AAAATCCTTT TAGAGATAAT AGATGAAGGT CAGAAAAAGG GTGAATTTAC AGATAAATTG TCCTGCAAAG AGCTAGCCCA ATATTGTATG TCTTTTACAT GGGGTGTTTT GCATAATTGG ACATTGGAAA ACGGCGAATA CGATATTGAA GAAAAAATGA AGAGTTATTT AAAGGTATTT ATTTTGTCGA TACTATATTA A
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Protein sequence | MRYTSRELKA KKNKKKIFVT AIDLIRKKGY DNVSINEICS LSGFTKGAFY HYFNSKEDLL IQLLRDVDDY YTVEVLPKLD GMSSTEKLTY FMQQFAYCGY GVGVDIINNL FKSQTKVLND FMNDYDRPFF KILLEIIDEG QKKGEFTDKL SCKELAQYCM SFTWGVLHNW TLENGEYDIE EKMKSYLKVF ILSILY
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