Gene Nther_2575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2575 
Symbol 
ID6317036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2764108 
End bp2764698 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content30% 
IMG OID642644956 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001918721 
Protein GI188587176 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.230257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATATA CTAGTAGAGA ACTAAAAGCC AAAAAAAATA AGAAAAAAAT TTTCGTTACT 
GCAATTGATT TAATAAGAAA AAAAGGTTAT GACAATGTAT CAATAAATGA AATTTGCTCC
TTGTCAGGAT TTACTAAAGG GGCTTTTTAT CATTACTTTA ACTCAAAAGA AGACTTATTA
ATCCAATTGC TCAGAGATGT AGATGACTAC TATACTGTGG AGGTATTACC TAAACTCGAT
GGAATGTCAT CTACTGAAAA GTTAACTTAT TTTATGCAAC AATTTGCGTA TTGTGGTTAT
GGAGTAGGTG TTGATATAAT AAATAACCTG TTTAAGAGCC AAACAAAGGT TTTGAATGAT
TTTATGAACG ATTATGATAG ACCTTTTTTC AAAATCCTTT TAGAGATAAT AGATGAAGGT
CAGAAAAAGG GTGAATTTAC AGATAAATTG TCCTGCAAAG AGCTAGCCCA ATATTGTATG
TCTTTTACAT GGGGTGTTTT GCATAATTGG ACATTGGAAA ACGGCGAATA CGATATTGAA
GAAAAAATGA AGAGTTATTT AAAGGTATTT ATTTTGTCGA TACTATATTA A
 
Protein sequence
MRYTSRELKA KKNKKKIFVT AIDLIRKKGY DNVSINEICS LSGFTKGAFY HYFNSKEDLL 
IQLLRDVDDY YTVEVLPKLD GMSSTEKLTY FMQQFAYCGY GVGVDIINNL FKSQTKVLND
FMNDYDRPFF KILLEIIDEG QKKGEFTDKL SCKELAQYCM SFTWGVLHNW TLENGEYDIE
EKMKSYLKVF ILSILY