Gene Nther_2536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2536 
Symbol 
ID6316349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2732328 
End bp2733611 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content34% 
IMG OID642644919 
Productnucleotide sugar dehydrogenase 
Protein accessionYP_001918684 
Protein GI188587139 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1004] Predicted UDP-glucose 6-dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.171539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAAAA TATCTGTCAT TGGTACAGGG TATGTGGGTT TGTCAACAGG AGTTTGTCTA 
TCTGATATGG GTAACCAAGT CACATGTGTT GACATCGACG AAGAAAAGAT AAATACATTA
AAAAATGGAA AGTCTCCTAT ATATGAACCG GGAATGGAAG ATCTAATACA TAAAAATACG
AAAGCTGATA GGTTGCAGTT TACTACCAAC TTAGAAAGTG CAGTCCAAAA TACAGATATC
ATATTTATAG CTGTAGGAAC ACCATCTAGA GATGATGGTT CAGCTGATTT ATCTTTTATA
TACGAAGCAT CTAAAACAAT AGCTAAAGCA ATGAATGATT ATAAAATAAT AGTAACTAAG
AGCACAGTAC CAGTGGGAAC CAACAAAGAA ATCGAAGATA GTATATCCCA AAATACTGAT
CAAGATTTTT CAGTGGTTTC CAGCCCTGAA TTCCTGAGAG AAGGATCTGC AATATATGAT
ACAATGAATC CTGATCGAAT AGTAATAGGT TACCGTGATG AACAAGCTGG ACAAACTATC
AAGGACTTAT ATAAAGACTT TGATACTGAA TTTGTTATGA CTACTACAGA AAGCTCTGAG
ATGATTAAAT ATGCCTCTAA TGCTTTCTTA GCTACTAAGA TATCTTTTAT TAACGAAATG
GCTAATATTT GTGAACGAGT TGGGGCCAAT GTAGAGGAAG TAGCTAAAGG AATGGGCCTT
GATCATAGAA TAAGTGATAA ATTCTTAAAT GCAGGTATAG GTTACGGAGG TAGTTGTTTC
CCGAAAGACA CTAAAGCATT AATTAATAAA GCTGAAGAAG TGGATTATAA TCTAAAGATA
GTTAAAGCTG CTGAAGAAGT GAATGAAAAA CAAAAGCTGA TTGTAGTTGA TAAATTGAAA
GAAGTACTAG GTGACTTAGA AGGAAAGACA ATAGGGATAT TAGGACTTGC ATTCAAACCA
AACACCGATG ATATAAGAGA GTCACCAGCA TTAAAGATTA TCCCAAAACT ATTGGAGGCT
GGTGCCAATG TTAAAGCTTA TGACCCAAAG GCCATGGAAA ATGCTAGAAA AGTACTTCCT
GGTGATGTTG TGTATTGTTC TGTTTCTGAA GAGGTAGCAA AAGGTGTAGA CGCTGTGGCT
TTGCTTACAG AATGGAATGA ATTTATAGAA ATTGAGTGGA AGGACATCTC AATTAAAATG
AATCAAGCAA TTATAATTGA TGGCAGAAAT TTCTTAGATG TTACTTATTT ACAAGAACAA
GGTTTTAGAT ACATATGTAT TTAA
 
Protein sequence
MYKISVIGTG YVGLSTGVCL SDMGNQVTCV DIDEEKINTL KNGKSPIYEP GMEDLIHKNT 
KADRLQFTTN LESAVQNTDI IFIAVGTPSR DDGSADLSFI YEASKTIAKA MNDYKIIVTK
STVPVGTNKE IEDSISQNTD QDFSVVSSPE FLREGSAIYD TMNPDRIVIG YRDEQAGQTI
KDLYKDFDTE FVMTTTESSE MIKYASNAFL ATKISFINEM ANICERVGAN VEEVAKGMGL
DHRISDKFLN AGIGYGGSCF PKDTKALINK AEEVDYNLKI VKAAEEVNEK QKLIVVDKLK
EVLGDLEGKT IGILGLAFKP NTDDIRESPA LKIIPKLLEA GANVKAYDPK AMENARKVLP
GDVVYCSVSE EVAKGVDAVA LLTEWNEFIE IEWKDISIKM NQAIIIDGRN FLDVTYLQEQ
GFRYICI