Gene Nther_2518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2518 
Symbol 
ID6316410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2711229 
End bp2712365 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content30% 
IMG OID642644902 
Productprotein of unknown function DUF955 
Protein accessionYP_001918667 
Protein GI188587122 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2856] Predicted Zn peptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.010681 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGTA AAAATAAAGC TTATATTAAT CCAGAAATTC TTAAATGGGC TAGAGAAGAA 
ATGAATTATG ATATTGATGA AGCTGCAAGA AAGATTGGGA TAAATTCTCA AAAATTAATT
CAGTGGGAAG CTGGTCAGAA AATGCCTACA TTAAGGCAAT TAAGATTAAT TGCTAAATTA
TACAAGCGAC CTTCTGCATT CTTTTATTTA AAGGATGCTC CTGATGCTAC TAAACCAGAT
TTACCTGACT ATAGACAATT ACCAGATGAA AATTTAGAAA GAACGCCTCA GATGTCTTTA
CAAATCAGAC GTGCTTTTGA AAGGCGAGAA ACTTATATTG AACTTTTACA TTATTTAGGT
AAATCTTGCC CTGAATTTAA ATTTGAAATT GACAGCAAGA TTTCTACTAC TGAATTAGCT
TTGAAAATAA GAGAACAGTT AGGTATTTCT ATAGATGATC AATTTTCTTG GAAAGATCAT
TACACTGCTT TGAATTCCTG GATAGATCTA CTTGAAAAGC AAAATATTTT GATATTTCAA
ACTGGGGAAT TAGATTTAGC TGAAATGAGG GGACTTTCTA TAAGTGAACA ATTTTTACCA
ATTATTTTAA TTAATAGTAA AGATTCCCCA CGTGGGAGAA TTTTCACTTT AATGCATGAA
TTAGTTCACA TAGTGATTGG TCAAAGTGGG ATTTGTGATT TAGATGATAA TGATAGTAAT
GATTTTGAAG TATTTTGCAA TAAGGTTGCA GGAGAAATAC TTGTTCCTAA ACAAGTATTA
AAAAATGATT TAGACAGTAT TACCGATTAT AGAGATCCAT TTCAGTTAGA ATATTTAGCC
AATCGTTATA TGGTTAGTGT TGAAGTAATA TTGAGGAGAT TATTGATTTT AAATAAAATA
ACCAAAAACT TTTATCAAAA AAAACGAGAA GAATATCTTG AAACTTATAA AAAATCTAAA
AGTCAAGGTT TTTTGCTACC TGCAAAAAAA GTTGTTAGAG ATAATGGAAA GCTATATACT
GACCTGATAA TTTCTGCTTA TCGTGATGAT ATTATAAGCC TTAGAGATGT ATCCAATTAT
TTGGGGAACT TTAAAATTAA CCATTTACCG AAAGTAGAAT CCCAATTATA TAAATAA
 
Protein sequence
MASKNKAYIN PEILKWAREE MNYDIDEAAR KIGINSQKLI QWEAGQKMPT LRQLRLIAKL 
YKRPSAFFYL KDAPDATKPD LPDYRQLPDE NLERTPQMSL QIRRAFERRE TYIELLHYLG
KSCPEFKFEI DSKISTTELA LKIREQLGIS IDDQFSWKDH YTALNSWIDL LEKQNILIFQ
TGELDLAEMR GLSISEQFLP IILINSKDSP RGRIFTLMHE LVHIVIGQSG ICDLDDNDSN
DFEVFCNKVA GEILVPKQVL KNDLDSITDY RDPFQLEYLA NRYMVSVEVI LRRLLILNKI
TKNFYQKKRE EYLETYKKSK SQGFLLPAKK VVRDNGKLYT DLIISAYRDD IISLRDVSNY
LGNFKINHLP KVESQLYK