| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_2316 |
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| Symbol | |
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| ID | 6315793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | - |
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| Start bp | 2463322 |
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| End bp | 2465355 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 642644703 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001918469 |
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| Protein GI | 188586924 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 93 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACA AGCTAGAAAA ATTAAGACAA AGACAAGCAG CTTTACTGAA ACAGGCTAGA
GAAATTTGGG ATAAGCAATT TACTGAAAAT AGAGAGTTAA CTGAACAGGA ATATAAACAG
TACCAAAAAT TGATGAAAGA TATTAGCAAA TTAAAGGATA AAATAAACGA AGAGCTGCGA
CTAAAAGAGT TGGAAGAAAA TTTAAATTCT TCTGAACAAG CGAACTTAAA TGCAGAGGGT
AAACAGGAAG TGAACTTGGA ATCAGAAGGT GAACAGCCAG TTAGTTCGGA GCCAGCTAGT
TCGGAGACAG AAAGTGAACA GCAATTAAAC TCGGAGACAA AAAGTGAACA TGATAATAGT
GAACAAGCCG AAGGTCAGGA AACTACCGAC AAGGTTGAAA ATGAAGATGA AACTAAAACT
GAAACTGTTA ACAATCAAAG TCAAACTGAT GATAGCAATA CTCATGATAG TGCTTATGAT
AATGATCAAG ACCCGAAACA GAAATGGATA GTAGGAATGG AAGAGAAAAA CCAAAGTCAG
CATGAATCGA GGAACCAAAA AGCTGATGTT CAATTAGGAG AAGTGTTACC ACCAGAAAAT
ACTGAAACTG AAAATAATGA AAATGGTCGA GGAAAAGCCT CATTACTATC AAGGCTGAAT
AAACGCAAGC AAGAAGCTGC CCTCATGGAA TCAGCCAAGG GTTCTAATAA AAGCAATCAA
CCGAATAATC AAACAACTTC TCAACCTAAA TCTGGAAAGA ATGGTAGGGC TAAAGCTAAC
GGGCAAGTTG AAGATAAGGA CGATTTTAGA GAACTAAAAA GTAGACTCCA TAGGGCTTTA
ATTGATGAAA TTGACAAGGA TATATTGCAA GAATCTAACT CAGAGGATGA AGAATTAGAA
CTAAAATCAG AAATCGAAGA AACGGTGGAA AATCTATTAG ATCAAGAAGA AAAACCTTTA
TCTTCAACTG ATCGTGACAA AATCAAAGCG GAAATCCTAA ACGAAACTTT GGGATTCGGA
CCTATTACTC CTCTAATTGA AGATGAAAAT GTTAGTGAAA TAATGGTAAA TGGACATGAT
CAGGTTTATG TCGAGGAAAA TGGCAAATTA AAGTTAACCG ATATTAAATT TCGAGATGAA
CAGCATGTTA TTCATGTGAT TGAAAAAATT GTCGCTCCAC TGGGACGAAG AATAGATGAA
AGTTCTCCCA TGGTTGATGC CAGGCTACCT GACGGATCTA GGGTAAACGC CATTATCCCA
CCATTATCTT TGACAGGTCC GGTAATTACT ATCAGAAAAT TTTCCGAAGA TCCCTTAACA
GCCAAGGATT TAATTAGTTT TGGAACTATG ACTACTGAAA TCTCAGACTT TTTGAAGAAA
TGTGTTAAGA ATAGATTGAA TGTGGTAGTC AGTGGTGGTA CAGGAAGTGG AAAGACAACA
ACTTTAAACG TACTGTCATC TTTTATCCCA CAAGATGAGC GGATTGTAAC TATTGAGGAT
GCTGCCGAAT TAACGCTACA CCAGGATCAT GTGGTAACTT TAGAAACCAA GCCACCTAAT
ATGGAAGGTA AGGGAGCCAT TACAATGAGA GAACTGGTGC GTAATTCCCT GCGCATGAGA
CCTGACCGTA TTGTAGTAGG AGAGGTCCGG GGAGGAGAGG CCCTAGACAT GCTCCAAGCC
ATGAACACAG GTCATGATGG TTCTCTGACA ACAGGTCACG CCAATTCCCC TAGAGATATG
CTGTCTCGCC TGGAAACTAT GGTTTTAATG GCAGGTATGG ACCTACCAAT CAGGGCAATA
AGAGAACAAA TTGCTTCAGC CATTGATTTA GTTGTCCAGC AGAGTCGATT AGAGGATGGT
TCAAGAAAAA TAACGCAAGT TAGTGAAGTT CAGGGTATGG AAGGAGATGT TATTACAATG
CAAGACTTAT TCACCTATAA ACGCCAGGGT CGGGATTCCA AAAATAAAAT TACTGGTAAA
CACGAGTCAA CGGGCTTTAC TCATGCTTTT TTAGAAAAAA TGGAGATGAA CTAA
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| Protein sequence | MSNKLEKLRQ RQAALLKQAR EIWDKQFTEN RELTEQEYKQ YQKLMKDISK LKDKINEELR
LKELEENLNS SEQANLNAEG KQEVNLESEG EQPVSSEPAS SETESEQQLN SETKSEHDNS
EQAEGQETTD KVENEDETKT ETVNNQSQTD DSNTHDSAYD NDQDPKQKWI VGMEEKNQSQ
HESRNQKADV QLGEVLPPEN TETENNENGR GKASLLSRLN KRKQEAALME SAKGSNKSNQ
PNNQTTSQPK SGKNGRAKAN GQVEDKDDFR ELKSRLHRAL IDEIDKDILQ ESNSEDEELE
LKSEIEETVE NLLDQEEKPL SSTDRDKIKA EILNETLGFG PITPLIEDEN VSEIMVNGHD
QVYVEENGKL KLTDIKFRDE QHVIHVIEKI VAPLGRRIDE SSPMVDARLP DGSRVNAIIP
PLSLTGPVIT IRKFSEDPLT AKDLISFGTM TTEISDFLKK CVKNRLNVVV SGGTGSGKTT
TLNVLSSFIP QDERIVTIED AAELTLHQDH VVTLETKPPN MEGKGAITMR ELVRNSLRMR
PDRIVVGEVR GGEALDMLQA MNTGHDGSLT TGHANSPRDM LSRLETMVLM AGMDLPIRAI
REQIASAIDL VVQQSRLEDG SRKITQVSEV QGMEGDVITM QDLFTYKRQG RDSKNKITGK
HESTGFTHAF LEKMEMN
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