Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_2305 |
Symbol | |
ID | 6314644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 2449230 |
End bp | 2451035 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 642644693 |
Product | putative sigma54 specific transcriptional regulator |
Protein accession | YP_001918459 |
Protein GI | 188586914 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 81 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATTTTTG TTGCTGTAAA GAGGTGGGGT GTTCCAGTGA CCAAGATTGA TAACAAAGGA GTACAGCAGA TAGCTGAAAC GATTTCTGAT GTACTTCTTT TGGATGTGAC GATTGTTGAT TCTGACTTAA TTAGGGTAGC CGGGACTGGC AGCTACAAAA ACAGAATAGG GGAGAGGTTA CCCCCAGGAT CTGGTTATGA ATTTTCTATT AAATCAAGAC AAGCTACAAC TATTAACAAA CCTGGTAAAA ATCAAATCTG TTATTCATGT ACAAAAAAAT CGGAGTGTCA AGAAAAAGCC CATATGTTAT CGCCAATTAA CTTAAATGGA CAGGTAATTG CAATTATAGG AATTACTGCT TTTACCGAAT CACAAAAACA AGATCTGACT TACGCAGAAG AAAAATATAG AAGCTTTATC AAAAAAATGT CTGAACTGCT TGCCGATAGT TTTTCCAATG AACAAATCAT ACTGGAAAAG ACTAAAGCTT ATGCCCAGGT AAGCGCCATT GTCAATTCTG TTTATGAGGG AATTCTGGCA GTTGATGATT ATAATGAAGT TATTGCTTGT AATGATGCTG TGCGAGATTT ACTGGATATT AGAGGAGATA TTATTGGTCA AAATGTGGAA AATGTTGTAC CTGAACTACC CTTTGAAGGG GTAATAACTA CCGGGACAAG TAAACTAGGG CACGAACAGT ACTTTTCTAA AGTAGGGATT CACTGTTTGG TCAATATGAA ACCTATTAAA ATGAATAATA AAGTTGTAGG TGCAGTAGCT ACTGTCAGGG ACACTAAAGA GATTGAAAAA CTCGCTTTTA GGGTTAGTGG TAATACAGCG GGATTTTCAT TCAATGCAAT TATTTCTAAA AATAATAATA TCAAAGAGTT AAAGGAAAAG GCCAAAAAAG TTAGTCAAAC GGATTCTACA GTACTTATCC GAGGTGAGAG TGGAACAGGC AAAGAACTTT ATGCCAGGGC AATTCATTCT GCTAGTCCTA GGTGGAAAGG ACCATTTGTT CCCGTTCACT GCGGGGCTAT ACCGGAAACA TTACTGGAAA GTGAATTATT TGGTTATGAA TCGGGTGCTT TTACAGGAGC TAAAAAAGGC GGGAAAATAG GTAAGTTTGA ATTGGCTGAA GGTGGAACGA TTTTTCTAGA TGAGATTGGG GACATGCCGA TACATTTACA GACAAAACTG CTTAGAGTTA TGCAAGATGG GACTTTTGAA AGGATAGGAA GCCCTGAAAC TATTAAAATA GACGTGCGGG TTCTTGCCGC TACTCACCAG CCCTTGGAAG AGTTTATTGA AAAAAACAAG TTTAGAAGAG ATTTATTTTA TAGATTGAAT GTGGTACCTC TTTTTATTCC CGCTCTGAGG GAACGACGAG AGGATATTTC ACTACTTCTT AATCATTTTC TAAATAAATA TGCCAATAAA TTAAAACGGG AACAGCCAGC TTTGTCACGG GAATTAATGA GCTTTTTAGA GCAATATAGC TGGCCTGGGA ATGTGAGAGA ACTGGAAAAT GTAGCGGAAT ATTTTATAAA TATTAATGAG AAAGGTTATT TAGATTTAGG AGATTTACCC AAAAATATGA AAGATAAGCT ACTAGAAACC CAGGATTATC AAAAAAATGT TGGAGATGAT GAGATCTTAC CTCTAGAGGA ATTAGAAAAA AGGAGTTTCG AAAAAGCAGT TAAAATCTAT GGTATCAGTG AACAAGGAAA ACAACTCATG GCAGGAAAAT TAGGTGTTAG TAGAGCTACA GTTTATCGTA AACTAAAAAA ATACGGCCTG ATATAA
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Protein sequence | MIFVAVKRWG VPVTKIDNKG VQQIAETISD VLLLDVTIVD SDLIRVAGTG SYKNRIGERL PPGSGYEFSI KSRQATTINK PGKNQICYSC TKKSECQEKA HMLSPINLNG QVIAIIGITA FTESQKQDLT YAEEKYRSFI KKMSELLADS FSNEQIILEK TKAYAQVSAI VNSVYEGILA VDDYNEVIAC NDAVRDLLDI RGDIIGQNVE NVVPELPFEG VITTGTSKLG HEQYFSKVGI HCLVNMKPIK MNNKVVGAVA TVRDTKEIEK LAFRVSGNTA GFSFNAIISK NNNIKELKEK AKKVSQTDST VLIRGESGTG KELYARAIHS ASPRWKGPFV PVHCGAIPET LLESELFGYE SGAFTGAKKG GKIGKFELAE GGTIFLDEIG DMPIHLQTKL LRVMQDGTFE RIGSPETIKI DVRVLAATHQ PLEEFIEKNK FRRDLFYRLN VVPLFIPALR ERREDISLLL NHFLNKYANK LKREQPALSR ELMSFLEQYS WPGNVRELEN VAEYFININE KGYLDLGDLP KNMKDKLLET QDYQKNVGDD EILPLEELEK RSFEKAVKIY GISEQGKQLM AGKLGVSRAT VYRKLKKYGL I
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