Gene Nther_2280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2280 
Symbol 
ID6316624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2424667 
End bp2425347 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content42% 
IMG OID642644668 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_001918434 
Protein GI188586889 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000058005 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAA ACAACTTTTT TACTTCTATT ATTAAAGCAC CTATTAACAG GCGAAAATTC 
TTAAAAATTA GTGGTGCCGG TGCAGCTTTG ACAGCAGCTG GTCTAAGTTT ATCAGGATGT
GGTAAAGACA GCAGTGTTGA GGCCGGCGAA GATCTATCAT CTTCCGAGTA TATGCTGGTA
GTTGATTCCA CTAGGTGTTC AGGATGTCGC CGGTGTGAAA CTATTTGCTC AGTCTTCAAC
CGAGGAAGTT CCAACCCGAA TGTTTCGGGA ATCAAAATTG CTCGAAATCA AAATTATGGT
CAACAAAGCT CCACTTTAGG CTTCTGGAAT GGAGAGGGAT TGTTTGGCAA CTTCAGAATT
ATACCAGAAA CTTGCATTCA GTGTGAAGAA CCAGTAATGT GTGCAGAAGT ATGCCCCCAA
AACGCAATTG GTAGCCATCC TGAAACAGGG GCTAGAGTTA TTGATGAAGA TGAATGCGTT
GGATGTGGTG AATGTGTGGA TGCTTGTCCT TGGGAAATGA TTGCTATGGA TCCCAATGAT
AATGTGGCAG CTAAGTGTCA TATGTGCCAT GGTGATCCAC AGTGTGCTGC TAACTGTCCA
AATGGTGCTA TAAGCTTAGA AAGATGGCAG GATAGGTCCA AAGATCAACC TATTAGAAAC
CATGAATCGG TCTTATCATA A
 
Protein sequence
MSENNFFTSI IKAPINRRKF LKISGAGAAL TAAGLSLSGC GKDSSVEAGE DLSSSEYMLV 
VDSTRCSGCR RCETICSVFN RGSSNPNVSG IKIARNQNYG QQSSTLGFWN GEGLFGNFRI
IPETCIQCEE PVMCAEVCPQ NAIGSHPETG ARVIDEDECV GCGECVDACP WEMIAMDPND
NVAAKCHMCH GDPQCAANCP NGAISLERWQ DRSKDQPIRN HESVLS