| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_2250 |
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| Symbol | |
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| ID | 6316996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | - |
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| Start bp | 2387750 |
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| End bp | 2389465 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642644638 |
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| Product | PAS modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_001918404 |
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| Protein GI | 188586859 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.28606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAGA ATTTTGATAT AGATTCAGTT TTGGAATCGG TCTATAATGG GATTATAGCT
ATAAATAGGG CGGGGGAGAT CATGCTCTTC AACAGATCTG CTAGTGAGTT ATTAAACATA
TCAAAAGAAA AGGCAATAGG AAAAGACATT CGAGATGTAA TTCCGAAAAC TGAATTATTC
AAGGTCATGG AAACAGAAAA AACTTACTCA TCGGAAAAAG GACAATTTAA TAATAAAACT
ATGTTGACAA ATCGTTCGCC TATTATAAAG GATGGGCAAG TAATTGGGGC TCTAGGGGTT
TTTCAAGATA TCTCGGAATT AGAACACATA TCCCAAGAAC TTGCCAAAAC TAAAGCAATA
AATGATGAGT TAAGAGCAAT TATTGAATCT TCTTATGATG GTTTTTGGAT AACAGATGGT
GAAGGTTATA CTATCATGAT AAATAGTTCT TACGAGCGCA TTTCCGGTGC CAGAGCAGAA
GAAGTAGTAG GAAGGCATAT GAAGAAATTG GAAGAAGAAG GATTTTGCTC GGAATCTGTA
ACCTTAAAAG TATTAGAACA AAAAGAACGG GTAACATTAA TGCACGAATT ATTTTCTGGA
AAAAAAGTCA TGGTTACTGG TAATCCGGTG TTTGATAGTG ATGGAAATAT CACAAAGGTA
GTAACTAATG TCAGAGATAT TTCTGAACTA TTAAGTTTAA AGCAAGAATT AGAGCGGACC
CAAGTTTTAA CTCAACACTA TAAAGAAAAA TTAACTGAAA TGGAAATCAA GCTAGGTGAA
GGTGAAGTCA TAGCTAAGAG TAAAGTGATG AAAAATATAC TGGACCAATC TGCTAGAGTA
GCTTTATTTG ACTCAACAGT TCTTATAACT GGGGAAACTG GAGTGGGTAA GGAAGTGATT
GCTAAATATA TTCATCAACA GAGCAACAGA AAAGAAGATC CTTTTGTAAA AATTAACTGC
GGAGCAATAC CTGAGAATTT ATTAGAAAGT GAGCTATTTG GTTATGCACC TGGTTCTTTT
ACCGGTGCTT CTCAAAAAGG TAAGCCCGGA AAATTTGAAA TGGCCGATGG TGGGACTTTA
TTGCTGGATG AAATAGGTGA ACTTTCGAAA AACTTACAGG TGAAATTGCT GAGAGCACTT
CAAGATCAGG AAATTTATCG AGTTGGCGGG GTCAAGCCTA AAAAAATGGA TGTTCGGATA
TTAGCATGTA CTAATCAAAA TCTGAATAAA TTGGTATCTG AAGACAAATT TCGGGAAGAT
TTATACTATC GGATAAGCGT TGTTCCAATA TACATACCCC CATTGCGAGA ACGTTCTGAA
GATATCCCAT TTTTAATTAG ACATTTTACA AGAAAGTATA ATAATAAATA TAATATTAAT
AAAGGATTTT CTACGGAAGC CTTAAATCAA TTGATAAAAT ATAATTGGCT AGGTAATGTT
AGAGAGCTAA ATAATATGAT TGAGAGATTA ATTATTATGG TATCTAAAAA TCTTATAGAA
GAAACTGACT TGCCTGGACT AGCTCATCAT ACTAGCGATA CATCAATAAA CATGTCACTT
TCTGAAGCAT TGAATGAAGT CGAAAAAAAT ATGTTAAAAC GAGCATTAGG AGATTCACAA
ACTACTAGAG AAACTGCTGA AAAACTAGGA GTGTCACAGC CAACGGTAGT AAGAAAAATA
AAAAAACATA ACCTGAATAA AGATTTAATA AGTTAA
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| Protein sequence | MSQNFDIDSV LESVYNGIIA INRAGEIMLF NRSASELLNI SKEKAIGKDI RDVIPKTELF
KVMETEKTYS SEKGQFNNKT MLTNRSPIIK DGQVIGALGV FQDISELEHI SQELAKTKAI
NDELRAIIES SYDGFWITDG EGYTIMINSS YERISGARAE EVVGRHMKKL EEEGFCSESV
TLKVLEQKER VTLMHELFSG KKVMVTGNPV FDSDGNITKV VTNVRDISEL LSLKQELERT
QVLTQHYKEK LTEMEIKLGE GEVIAKSKVM KNILDQSARV ALFDSTVLIT GETGVGKEVI
AKYIHQQSNR KEDPFVKINC GAIPENLLES ELFGYAPGSF TGASQKGKPG KFEMADGGTL
LLDEIGELSK NLQVKLLRAL QDQEIYRVGG VKPKKMDVRI LACTNQNLNK LVSEDKFRED
LYYRISVVPI YIPPLRERSE DIPFLIRHFT RKYNNKYNIN KGFSTEALNQ LIKYNWLGNV
RELNNMIERL IIMVSKNLIE ETDLPGLAHH TSDTSINMSL SEALNEVEKN MLKRALGDSQ
TTRETAEKLG VSQPTVVRKI KKHNLNKDLI S
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