Gene Nther_2232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2232 
Symbol 
ID6315233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2370805 
End bp2371041 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content41% 
IMG OID642644620 
Productcarbon storage regulator 
Protein accessionYP_001918386 
Protein GI188586841 
COG category[T] Signal transduction mechanisms 
COG ID[COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) 
TIGRFAM ID[TIGR00202] carbon storage regulator (csrA) 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.000000917827 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTTGTAC TCACTAGAAA GCAAAACGAA TCCATTATGA TAGGTGATGA CATAGAAATT 
ACGGTAGTGG GTACAGAAGG AGACAAAGTG CGCCTGGGTA TCAAAGCCCC CAAAGATGTG
GAAATTCACA GGGCAGAAGT ATATCAAAAG ATCCAGGAGG AGAATGTGAA AGCTTCCCAG
GTTTCAGAAA ATGTGTTGGA TAAACTGTCC GATGCACTGC AAAAGAAAAA TAAATGA
 
Protein sequence
MLVLTRKQNE SIMIGDDIEI TVVGTEGDKV RLGIKAPKDV EIHRAEVYQK IQEENVKASQ 
VSENVLDKLS DALQKKNK