| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_2224 |
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| Symbol | |
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| ID | 6315402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | - |
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| Start bp | 2361572 |
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| End bp | 2363074 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 642644612 |
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| Product | diguanylate cyclase and metal dependent phosphohydrolase |
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| Protein accession | YP_001918378 |
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| Protein GI | 188586833 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000178543 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 1.10821e-21 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | TTGGCGGGAA AGGAAGATAA GTTTATGGGA GATGGTGGCT TTACTGGCAA AGATGAAAAT
TTGGATAGTA GGAATTATCA GGAGCTTTAC TGGGTACACA AAAGCTATTA TGAACAGCTC
TTTAAGCATA TGCCCGATGG TATTGCTCTG GTAGATCAAG ACAATAAAGT GATAGATGTC
AATCCAGTCT TTGAAAAAAT TTTTGGTTAT GATAAAGATG AAATTATTGG TGAAAATTTA
GATTGTATGA TTACCACACC AGAACTTTCT AAGGAAGCCG AAACCCTATC AAGTATGGCC
CAAAAAGGCA TGGTGGTTAA CCGATCCAGT CAGAGGATAA GAAAGGACGG TAAACCAGTA
TTTGTGAAAA TTACAGGTAT GCCATTAGTT ATCAATGATA AAATGGCAGG AGGTTTTGGA
ATTTATCAGG ATATCACCGA GGAAAAGCTG GCCAAGGAAC GTTTGGAATA CTTAAATAAT
AGGGACAAGC TCACAGGTAC TTATCACCGT CAGTATGTGG AGAATATGAT CTATGAGCTA
GAGAAAAACA ATGTTCCCGT AAGTTTTATT TTAGGTGATA TCAATGACTT GAAACTGGTA
AATGAGGTCT TCGGTCACCT GGAAGGGAAT AAGGTCTTGC AAAGGACTGT TAGGATCTTA
AAATCCGTAC TTCCTCATGA CGCCATTATA TCCAGGTGGA GTGGTGACGA GTTCTTAATA
GTACTTACTG AAACGGGTGA ATTAGAAGTT CAGCAGTGGC TCAAAAAACT TCGAGAGGCC
TTTGAATGGG AAAATATAAA TAAAAGGGAC AAGTTTCCCG TGATTTTATC CTTTGGATAT
GCAACCCGGA TTGGTGATGG TAGACCTGTT CGGGAAGTAC TCAAAAAGGC CGATGACAGG
ATGCAGCGCC AGAAATCTTT GAGCAGTCGC AGATTGAAAG GTGCTTCTGT AGAATTTCTC
AAGCGCATGA TGCCTGAGAA ATGTTCGGAA ACTGTAGAAC ATACTACTAG AATGAAACAT
ATAGCCAGGA TGATGGGAGA GGCCCTATAT CTTTCTGAAG CTGCCTTGGA TGAGTTAGAA
CTAATTGCAT CCTTACACGA TATTGGTAAA ATTGCCGTCC CGGAGAACAT TTTATTGAAG
GAAGGCCCCC TTGATGAAGA AGAATGGCAT GAAATCAAGA AACATCCAGA AATCGGATGT
CGAATTGCCC AGTCCATGGA AGAACTTCGG CCAGTAGCCG AAGGTATTTT GTACCATCAC
GAATGGATTA ACGGCAGGGG TTATCCCACA GGCCTTCAAG GTAGGGAGAT TCCCCTGGTG
GCCCGGGTGA TTTCCATTGT GGATGCCTAT GAAGTCATGA CCAGGGGTAG GCCCTATAAG
GGTCCGGTAA CGCCCCAAAA TGCCAGGGAA GAGCTAAAAA ATTCTGCCGG AACCCAGTTT
GACCCGGATT TGGTAGAACT CTTTTCTGAA GAGATCTTTC CAAAAATAAA GGAAAAATTT
TAA
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| Protein sequence | MAGKEDKFMG DGGFTGKDEN LDSRNYQELY WVHKSYYEQL FKHMPDGIAL VDQDNKVIDV
NPVFEKIFGY DKDEIIGENL DCMITTPELS KEAETLSSMA QKGMVVNRSS QRIRKDGKPV
FVKITGMPLV INDKMAGGFG IYQDITEEKL AKERLEYLNN RDKLTGTYHR QYVENMIYEL
EKNNVPVSFI LGDINDLKLV NEVFGHLEGN KVLQRTVRIL KSVLPHDAII SRWSGDEFLI
VLTETGELEV QQWLKKLREA FEWENINKRD KFPVILSFGY ATRIGDGRPV REVLKKADDR
MQRQKSLSSR RLKGASVEFL KRMMPEKCSE TVEHTTRMKH IARMMGEALY LSEAALDELE
LIASLHDIGK IAVPENILLK EGPLDEEEWH EIKKHPEIGC RIAQSMEELR PVAEGILYHH
EWINGRGYPT GLQGREIPLV ARVISIVDAY EVMTRGRPYK GPVTPQNARE ELKNSAGTQF
DPDLVELFSE EIFPKIKEKF
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