Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_2183 |
Symbol | |
ID | 6317209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | + |
Start bp | 2312199 |
End bp | 2313494 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 642644570 |
Product | N-acetylmuramoyl-L-alanine amidase |
Protein accession | YP_001918337 |
Protein GI | 188586792 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.000000115725 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAATAAAG TTAAGCTAGG CCTTTCTATG TTAGTCTTTC TCACTGTTTT AACTATGGTA AGCGGTGTGT TAGCAGGACA GGAAGTTAAG GTGTTTGTCG ATAACGAGGA AATAAACTTT CCAGATCAAA ACCCGTACAT AGACCAAAAC AACAGAACTC AAGTTCCAGT CAGATTTGTC AGTCAAGCTC TAGGAGGATA TGTTGAGTGG CATAGTGATA GCCAAGAAAT TGAGATAAAA TTGGGGGACG ATCGATTAAT CTTAGAAGTA GGTATCCAAA ATTACAGTTT AAATGGACAG GCACTGGATA TGGATACAGC TCCATTAATA ACCAATCAAG GCCGGACTAT GGTTCCACTG AGGTTTGTTA GTGAGGGACT TGGGGCACAA GTTAATTGGG TAGAAGAAGA GAATTCTGTT TATATTTCAC AGAGGGAAAA TAATCACCAA ATTGAAGATC TAGAACAGGC TGAGGTAACC GCTACTACAT TAAATGTAAG AACTGGCCCA GGACTAAACC ACGCACCAAT CCATCAAGTT CATGCTAATG AAACTTATCC AGTATTAGAA GAAGTTTCGT ATGAGTACGA TAATACTCAT CATGAATGGA TGAAAATCAA TTTACCAGAA CACAATGAAG TAGGATGGGT AAGTAGAGAC TTTGTAAGAT TGGCTGATGA TAATGATGGA GTAACCGAGG ACACGAACAA GCAAGAGGGA CATGAAGGAT CACCCTTACA AGGTTTTAAA ATAGTTATTG ACCCGGGACA TGGCGGAACT GACCCTGGAG CAGTTGGGCC TACTGGGCTA ACAGAAAAGG AAGTTGCTTT AGATGTATCC CTGAGGGCAA GAGATCTACT TGAGGACTTA GGTGCTGAAA CATACCTTAC TAGGTATTCT GATATTGATG TAACACTATA TGACAGAATC AATTTGGCTA ATCAAATTAA CGCCGATATT TTCATAAGTG TTCATGCTAA TGCAGCATTA AATAGATCTG CCCAAGGAAC TGAAACTTAT TACTCTTCAC AAAGAAGTCT TTACGACTAT AACTTGGCAA ATAGCCTACA AACAGCTTTA GTAAACAAAC TTGGTACAAT AGATAGAGGT ACTCTGGATA GAAGTTTCTA TGTGCTCAGG CACGGAAATA TGCCTTCGGC TTTAGTAGAG CTGGCTTTCG TTTCTAATTA CTGGGAGGAA TCTCTATTAA AAGACAATTA TTTTAGACAA AACGCAGCCC AGGCCATTAC CGATGGTGTT TATAATTATT TTAAAAGCAT CTCTCAAAGT TACTAG
|
Protein sequence | MNKVKLGLSM LVFLTVLTMV SGVLAGQEVK VFVDNEEINF PDQNPYIDQN NRTQVPVRFV SQALGGYVEW HSDSQEIEIK LGDDRLILEV GIQNYSLNGQ ALDMDTAPLI TNQGRTMVPL RFVSEGLGAQ VNWVEEENSV YISQRENNHQ IEDLEQAEVT ATTLNVRTGP GLNHAPIHQV HANETYPVLE EVSYEYDNTH HEWMKINLPE HNEVGWVSRD FVRLADDNDG VTEDTNKQEG HEGSPLQGFK IVIDPGHGGT DPGAVGPTGL TEKEVALDVS LRARDLLEDL GAETYLTRYS DIDVTLYDRI NLANQINADI FISVHANAAL NRSAQGTETY YSSQRSLYDY NLANSLQTAL VNKLGTIDRG TLDRSFYVLR HGNMPSALVE LAFVSNYWEE SLLKDNYFRQ NAAQAITDGV YNYFKSISQS Y
|
| |