Gene Nther_2183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2183 
Symbol 
ID6317209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2312199 
End bp2313494 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content39% 
IMG OID642644570 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_001918337 
Protein GI188586792 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.000000115725 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATAAAG TTAAGCTAGG CCTTTCTATG TTAGTCTTTC TCACTGTTTT AACTATGGTA 
AGCGGTGTGT TAGCAGGACA GGAAGTTAAG GTGTTTGTCG ATAACGAGGA AATAAACTTT
CCAGATCAAA ACCCGTACAT AGACCAAAAC AACAGAACTC AAGTTCCAGT CAGATTTGTC
AGTCAAGCTC TAGGAGGATA TGTTGAGTGG CATAGTGATA GCCAAGAAAT TGAGATAAAA
TTGGGGGACG ATCGATTAAT CTTAGAAGTA GGTATCCAAA ATTACAGTTT AAATGGACAG
GCACTGGATA TGGATACAGC TCCATTAATA ACCAATCAAG GCCGGACTAT GGTTCCACTG
AGGTTTGTTA GTGAGGGACT TGGGGCACAA GTTAATTGGG TAGAAGAAGA GAATTCTGTT
TATATTTCAC AGAGGGAAAA TAATCACCAA ATTGAAGATC TAGAACAGGC TGAGGTAACC
GCTACTACAT TAAATGTAAG AACTGGCCCA GGACTAAACC ACGCACCAAT CCATCAAGTT
CATGCTAATG AAACTTATCC AGTATTAGAA GAAGTTTCGT ATGAGTACGA TAATACTCAT
CATGAATGGA TGAAAATCAA TTTACCAGAA CACAATGAAG TAGGATGGGT AAGTAGAGAC
TTTGTAAGAT TGGCTGATGA TAATGATGGA GTAACCGAGG ACACGAACAA GCAAGAGGGA
CATGAAGGAT CACCCTTACA AGGTTTTAAA ATAGTTATTG ACCCGGGACA TGGCGGAACT
GACCCTGGAG CAGTTGGGCC TACTGGGCTA ACAGAAAAGG AAGTTGCTTT AGATGTATCC
CTGAGGGCAA GAGATCTACT TGAGGACTTA GGTGCTGAAA CATACCTTAC TAGGTATTCT
GATATTGATG TAACACTATA TGACAGAATC AATTTGGCTA ATCAAATTAA CGCCGATATT
TTCATAAGTG TTCATGCTAA TGCAGCATTA AATAGATCTG CCCAAGGAAC TGAAACTTAT
TACTCTTCAC AAAGAAGTCT TTACGACTAT AACTTGGCAA ATAGCCTACA AACAGCTTTA
GTAAACAAAC TTGGTACAAT AGATAGAGGT ACTCTGGATA GAAGTTTCTA TGTGCTCAGG
CACGGAAATA TGCCTTCGGC TTTAGTAGAG CTGGCTTTCG TTTCTAATTA CTGGGAGGAA
TCTCTATTAA AAGACAATTA TTTTAGACAA AACGCAGCCC AGGCCATTAC CGATGGTGTT
TATAATTATT TTAAAAGCAT CTCTCAAAGT TACTAG
 
Protein sequence
MNKVKLGLSM LVFLTVLTMV SGVLAGQEVK VFVDNEEINF PDQNPYIDQN NRTQVPVRFV 
SQALGGYVEW HSDSQEIEIK LGDDRLILEV GIQNYSLNGQ ALDMDTAPLI TNQGRTMVPL
RFVSEGLGAQ VNWVEEENSV YISQRENNHQ IEDLEQAEVT ATTLNVRTGP GLNHAPIHQV
HANETYPVLE EVSYEYDNTH HEWMKINLPE HNEVGWVSRD FVRLADDNDG VTEDTNKQEG
HEGSPLQGFK IVIDPGHGGT DPGAVGPTGL TEKEVALDVS LRARDLLEDL GAETYLTRYS
DIDVTLYDRI NLANQINADI FISVHANAAL NRSAQGTETY YSSQRSLYDY NLANSLQTAL
VNKLGTIDRG TLDRSFYVLR HGNMPSALVE LAFVSNYWEE SLLKDNYFRQ NAAQAITDGV
YNYFKSISQS Y