Gene Nther_2164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2164 
Symbol 
ID6316028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2292203 
End bp2292811 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content38% 
IMG OID642644551 
ProductThiJ/PfpI domain protein 
Protein accessionYP_001918318 
Protein GI188586773 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0000571514 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATCAAC ATTATAGTGT GGGGATTCTG ATTTTTGATC AGGTGGAGGT TCTAGATTTT 
ACTGGACCTT ATGAGGTGTT TTCAGTCACT AGATTTAAAG GTCAATCCTA TGATTCTGAA
GATAGGACTC CATTTCAAGT GGATACTATT TCGGAAACAG GTGAGCAAGT AGAGTGTCGT
CATGGTCTTA AAGTACAGCC CGACAGATCT TTTCAGACTA GTGGACAATA TGACATATTA
GTAATTCCGG GTGGATTAGG TGTGAGATGG CAAGTGAAAA ATTCAAAATT ATTAGACTGG
ATCAGAAAGC AAAATGAAGG GACAATGTTA ACAACTTCTG TCTGCACTGG TTCAATACTA
CTTGCCGAAG CTGGACTTTT GAAGGGCAAA AAAGCAACAA CTCATCATGA AAATTTAACA
AAGCTAGCAA GCTCTTATCC AGAGGTTACT GTAGTACGAG ATCAGAAAGT TGTGGATGAA
GGTAATTTCA TAACTTCTGC CGGGATTTCC GCTGGGATAA ATATGGCTTT TCAAGTAGTT
GAAAGGCTGT TTGGGGCTGA AATTTCTCAA CAAACCCAGG AATTTATGGA ATATAATCTT
AAACAATAA
 
Protein sequence
MNQHYSVGIL IFDQVEVLDF TGPYEVFSVT RFKGQSYDSE DRTPFQVDTI SETGEQVECR 
HGLKVQPDRS FQTSGQYDIL VIPGGLGVRW QVKNSKLLDW IRKQNEGTML TTSVCTGSIL
LAEAGLLKGK KATTHHENLT KLASSYPEVT VVRDQKVVDE GNFITSAGIS AGINMAFQVV
ERLFGAEISQ QTQEFMEYNL KQ