Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_2164 |
Symbol | |
ID | 6316028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 2292203 |
End bp | 2292811 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642644551 |
Product | ThiJ/PfpI domain protein |
Protein accession | YP_001918318 |
Protein GI | 188586773 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0000571514 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATCAAC ATTATAGTGT GGGGATTCTG ATTTTTGATC AGGTGGAGGT TCTAGATTTT ACTGGACCTT ATGAGGTGTT TTCAGTCACT AGATTTAAAG GTCAATCCTA TGATTCTGAA GATAGGACTC CATTTCAAGT GGATACTATT TCGGAAACAG GTGAGCAAGT AGAGTGTCGT CATGGTCTTA AAGTACAGCC CGACAGATCT TTTCAGACTA GTGGACAATA TGACATATTA GTAATTCCGG GTGGATTAGG TGTGAGATGG CAAGTGAAAA ATTCAAAATT ATTAGACTGG ATCAGAAAGC AAAATGAAGG GACAATGTTA ACAACTTCTG TCTGCACTGG TTCAATACTA CTTGCCGAAG CTGGACTTTT GAAGGGCAAA AAAGCAACAA CTCATCATGA AAATTTAACA AAGCTAGCAA GCTCTTATCC AGAGGTTACT GTAGTACGAG ATCAGAAAGT TGTGGATGAA GGTAATTTCA TAACTTCTGC CGGGATTTCC GCTGGGATAA ATATGGCTTT TCAAGTAGTT GAAAGGCTGT TTGGGGCTGA AATTTCTCAA CAAACCCAGG AATTTATGGA ATATAATCTT AAACAATAA
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Protein sequence | MNQHYSVGIL IFDQVEVLDF TGPYEVFSVT RFKGQSYDSE DRTPFQVDTI SETGEQVECR HGLKVQPDRS FQTSGQYDIL VIPGGLGVRW QVKNSKLLDW IRKQNEGTML TTSVCTGSIL LAEAGLLKGK KATTHHENLT KLASSYPEVT VVRDQKVVDE GNFITSAGIS AGINMAFQVV ERLFGAEISQ QTQEFMEYNL KQ
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