Gene Nther_2111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_2111 
Symbol 
ID6315813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2229043 
End bp2230329 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content39% 
IMG OID642644499 
ProductXanthine/uracil/vitamin C permease 
Protein accessionYP_001918266 
Protein GI188586721 
COG category[R] General function prediction only 
COG ID[COG2252] Permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000533126 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGAAT TTTTCGATTT TAAAAAACAT AACACATCAT TAAAGACAGA AGTTATTGCC 
GGAATTACAA CTTTCATGAC AATGGCCTAT ATTATCTTTG TTAACCCGGA TTTACTAGGT
GAAACAGGAA TGGATGAGGG AGCAGTTATG ACTGCTACAA TTATAACAGC GGCTGTTAGT
TGTATACTTA TGGGAATTCT GACTAATTAT CCTTTTGCAC TAGCCAGTGG TATGGGATTA
AACGCATTTT TTGCTTTTAC TGTTGCCCCT GAAGCTGGCT GGCAAGGTGC TCTAGCAGCT
GTATTAATAT CTGGAATTGT TTTTATAATT TTGGCTTTTC TAGGCTTAAT TGAAAAAATA
GATAGTGTGG TTCCGACGAC TTTAAAAAAA GCTGTAGCTG CAGGTATTGG ATTATTTATC
GCCCTGATAG GTTTTCAAAA TTCTGGTATA GTTGTACCTT ATCCTGACAC GTTAGTGACT
TTAGGTGATT TAACAGAACC TGGACCAATT GTCTCTATAT TAGGTCTAGT GGCAACAGCT
GCTTTAATGG CTTTAAAAGT TAAAGGTGCA ATTTTACTAG GTATTATAAT CAGTACTTTT
ATAAGTTTTT TTGTAGGTTT ACAAGCATTT CCCACAGGTA TCTCCGACTT TATCGGTCAA
CCTGCCAGTT TAGCACCTAT TGCTTTTCAA TTAGATTTTG GAGCTATTTT GGATCTAGGC
ATTATGACAA TTTTTGCCCT GGTCTTTGTC GATCTATTTG ATACCATGGG GACTCTCCTG
GGAGCAGGGG CAAGAGCAGG TTATCTTAAT GAACAAGGAA ACCTTCCCAA AGTAAAAAAC
GCCATGATTG CTGATGCCAT TGGTACAATA GGTGGAGCCC TGGTGGGAAC TAGTACTGTT
ACTACTTATG TAGAAAGTAC CTCGGGTATT TCTGAAGGCG GTAGAACAGG GGCAACTGCA
GTAGTTGTTG GCTTGTTATT TTTACTTGCT TTATTTTTAG CACCCTTTGC TTCCATGGTT
CCCAGTGAAG CCACCGCTCC TGCTCTAATA ATTGTTGGAG TACTTATGAT AGGTGCTGTG
CGGGACATAG ACTTTGAAGA TTTTACAGAA GCGTTTCCTG CTTTTATCAC TATTGCTTTG
ATGCCATTTA CTTATAGTAT TGCCCACGGT ATAGCAGGTG GATTTATTGC CTATCCACTC
GTAAAAGCTT TTGCCGGTAG AACTTCGGAA ATTCACTGGT TTAATTACTT GTTAGGCATA
ATTTCTATCT TCCATTTTGT AGGTTAG
 
Protein sequence
MEEFFDFKKH NTSLKTEVIA GITTFMTMAY IIFVNPDLLG ETGMDEGAVM TATIITAAVS 
CILMGILTNY PFALASGMGL NAFFAFTVAP EAGWQGALAA VLISGIVFII LAFLGLIEKI
DSVVPTTLKK AVAAGIGLFI ALIGFQNSGI VVPYPDTLVT LGDLTEPGPI VSILGLVATA
ALMALKVKGA ILLGIIISTF ISFFVGLQAF PTGISDFIGQ PASLAPIAFQ LDFGAILDLG
IMTIFALVFV DLFDTMGTLL GAGARAGYLN EQGNLPKVKN AMIADAIGTI GGALVGTSTV
TTYVESTSGI SEGGRTGATA VVVGLLFLLA LFLAPFASMV PSEATAPALI IVGVLMIGAV
RDIDFEDFTE AFPAFITIAL MPFTYSIAHG IAGGFIAYPL VKAFAGRTSE IHWFNYLLGI
ISIFHFVG