Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_2110 |
Symbol | |
ID | 6315812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 2226197 |
End bp | 2228641 |
Gene Length | 2445 bp |
Protein Length | 814 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642644498 |
Product | diguanylate cyclase and metal dependent phosphohydrolase |
Protein accession | YP_001918265 |
Protein GI | 188586720 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.406671 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.904687 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGATT ATAAAATAGA TAAGTCGCTT GAAGTAGGAG AATTAAAAAT AGAAGAAATC ATTGATATAG AAGAAATCAA ACCCATAATG GATGAGTTTT ATCAAAACAC GAAAATTAGC GCAGCTTTAA TGGACCTGGA GGGGAACATT TTAGTTTCTA CATATTGGCA AGATATTTGT GAAAATTATC ATAGAAAACA TTCCGAAACC CGGAAAAATT GCATACAAAG CGATCTTAAC TTTTCCAAGG GTGCTGAGAG TGGCAGCTAT GTAGCTTATA AATGTAAAAA TAATTTGCGC GATGTGGCAA TACCTATTCA TATAGAAGGA GAACAAATAG GTATTGTATT TGTGGGTCAA TTTTTTTATG AAGATGATGA GATAGATTTA GTATATTTTA CAAATCAAGC TGAAAAGTAT GGCTTTGATA AAGGCAAGTA CTTGCAAGCT CTTAAAAATG TTCCTAAAGT TAATAAGCTG AAATTACAAT CAATTATAAA CTTTTATACC AAACTAGCCC ATTTGATTTC TACTCTGGGT CATAAGAATG TCAAGCTTCA AAGGAATCTA AAAGCTCAGA ACAATGTAAA ACAAGCTCTT AGAAAAAGTG AGGAAAATTT AGCAGCAACC TTACATTCCA TTGGAGATGG TGTAATTGTT ACAGATAAAC AGGGTTTGAT AACCAGGATG AATCCAGTGG CAGAACAGTT GACGGGTTGG CCTATGAAAC AGGCTAAGGA TAAACAGTTA GAAATTGTGT TTTACGTTGT GGACCAGGCC GGAGAGAAAA TTTTGGATCC GGTTAAGCAA GTTATTCTCA ATGGTGAAAT TGTTGACTTG GGGAATAACT ATGCAACTCT GATTTCTCGC CATGGAAATA GAAGACAGAT TTCAGAAAGT GCTGCTCCAA TTTATAATCA AGAAGGGGAA ATTATGGGAG TAGTAATTGT TTTTTCAGAT GTTACAGAAC AATACAAGAT TCGCGAAGAC CTAAAAAAAT CTGAACAGCT ATTGCAATCG ACCCTTGATT CACTAAGTGC CCACATTTGT GTTCTTGATG AAGAAGGCGT TATACGTATT GTCAATAAAT CATGGATGGA TTTTGGTCGT GGAAATAATG CCCCTCTAGA TTTGATAAGT CCAGGCGTCA ATTACCTAGA AGTATGTGAA AGAGCTGAAG GTGATGGTGC CGAATTTGCG TGGGAATTTC TAAATGGTAT TTACGACGTC AAAAAAGGTG AATTAAATTA TTTTGAGTTG GAATATCCTT GTCATTCTCC CACAAAAAAC AGATGGTTTA TTGGCCGGGT AACTCCTCAT CAAGGATACT TTAATAACTC AAGTGATACT GGGATTGTAA TTGCCCATGA AGATATAACT GCAAGAAAGC AAGCAGAAGA GAGAATAAAG TATTTAAGTT TTCATGATAG CCTGACAAGT CTTTATAATA GGGCTTATTT GGAAGAGCAA ATCAAGAAGT TAGATGTTGA AGGACAGTTA CCGATTAGTT TGATACTGGC AGATTTAAAT GGACTAAAAT TGGTGAATGA CAGTTACGGA CATGAATGTG GGGATCAATT ACTTCTTCAA ACTTCAAAAA TATTAACGCA ATCCTGCAGA AAAGATGATA TTATTGCCAG ATGGGGTGGA GATGAATTTG TCATTTTACT GACAAAGACA AATAAGGAAG ATGCAGAGAA AATATGTAAT CGGATAAAAA ATCTCTGTAT AACAACTAAA CAAGAAGAAA TCCCAGTTTC TATAACCTTG GGAGTGTCTA CCAAAGAAAA TAGTGAAGAG GATATATATA ATGTATTGAT TGCTGCAGAA GAAGAAATGT ATAAGAATAA ATTAGTTGAA AGCCGAAGTG CCAAGAGCAA TATTTTAAAG GCTTTACTAA ATACTCTGGG GGCTAAAAGT TTTGAAACGG AAGAACACGC TAGACGAATG CAAGAAATGG CATATAAAAT AGGTGTTAAA ATAGAATTAA CTGAATCTGA ACTGGATCGC CTGGTGTTAC TAGTTTCAAT GCATGATATT GGAAAAATTA CCATACCCGA AGAAATTTTA ACTAAACCAG AAAACTTGAC TAAAAATGAA TGGGAATTAG TAAAGAAACA TCCAGAAACA GGGTATTGGA TTGCTCGGTC AACTGAAGAG TTTTCTCATA TAGCAGAAGA TATTTTGTAT CATCATGAAA AGTGGGACGG AACGGGCTAT CCTCAAGGAT TAGAAGGTGA AAAAATTCCT TTATTAGCAA GGATAACTGC TATAGTTGAT TCATATGATG TAATGATCTA TGGCAGACCC TATAAGGAAG CCGTTCCACC TGAACAAGCA TTAAGGGAAA TTAAAGACAA TGCAAGAACT CAATTTGATC CAGAATTAGT TGATATTTTT ATGGGTGTTT TAGAAGAAGA CTACGGTATT TTTGAAGTTC AGTAA
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Protein sequence | MSDYKIDKSL EVGELKIEEI IDIEEIKPIM DEFYQNTKIS AALMDLEGNI LVSTYWQDIC ENYHRKHSET RKNCIQSDLN FSKGAESGSY VAYKCKNNLR DVAIPIHIEG EQIGIVFVGQ FFYEDDEIDL VYFTNQAEKY GFDKGKYLQA LKNVPKVNKL KLQSIINFYT KLAHLISTLG HKNVKLQRNL KAQNNVKQAL RKSEENLAAT LHSIGDGVIV TDKQGLITRM NPVAEQLTGW PMKQAKDKQL EIVFYVVDQA GEKILDPVKQ VILNGEIVDL GNNYATLISR HGNRRQISES AAPIYNQEGE IMGVVIVFSD VTEQYKIRED LKKSEQLLQS TLDSLSAHIC VLDEEGVIRI VNKSWMDFGR GNNAPLDLIS PGVNYLEVCE RAEGDGAEFA WEFLNGIYDV KKGELNYFEL EYPCHSPTKN RWFIGRVTPH QGYFNNSSDT GIVIAHEDIT ARKQAEERIK YLSFHDSLTS LYNRAYLEEQ IKKLDVEGQL PISLILADLN GLKLVNDSYG HECGDQLLLQ TSKILTQSCR KDDIIARWGG DEFVILLTKT NKEDAEKICN RIKNLCITTK QEEIPVSITL GVSTKENSEE DIYNVLIAAE EEMYKNKLVE SRSAKSNILK ALLNTLGAKS FETEEHARRM QEMAYKIGVK IELTESELDR LVLLVSMHDI GKITIPEEIL TKPENLTKNE WELVKKHPET GYWIARSTEE FSHIAEDILY HHEKWDGTGY PQGLEGEKIP LLARITAIVD SYDVMIYGRP YKEAVPPEQA LREIKDNART QFDPELVDIF MGVLEEDYGI FEVQ
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