Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_2046 |
Symbol | |
ID | 6315564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 2161483 |
End bp | 2162667 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642644434 |
Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
Protein accession | YP_001918201 |
Protein GI | 188586656 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000000615426 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0000000000430181 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACCACTA ATATGAGTGA AAAAATTAAA GTTAAAAATT TGTCAAAGAT TTTCGGTCCT AAGCCAAAGT CAGTTTTACC CTTACTTGAA AAAAATCAGT CGAAAGAGGA CATTCTTTCA AAAACTGGAC ATACAGTTGG TGTAAATAAT GTTTCTTTTG ATGTCAAAGA AGGAGAAACC TTTGTTATTA TGGGATTGTC TGGTTCAGGT AAGTCTACAT TAATCCGGTG TCTTAATTTA TTAAATAAAC CTACTACCGG AGAAATTTAC GTAAACGAGG ATAATATTCT AGAATTTGAT AAACAAAAAT TAAGGGATTT TAGACAGAAT CAATTATCTA TGGTTTTTCA ACACTTTGGT TTATTTACTC ATAGAACAGT ACTAGAAAAT GTAGAATTTG GTTTAGAAAT TAAAGGTGCA AGTGAACAAG ACAGAAGAGA ATTAGCGAGA AAGACTCTTG AATCTGTCGG TTTAAAAGGC TGGGAGGATA AAATGCCCAG CGAATTGAGT GGCGGAATGC AGCAAAGGGT TGGGCTCGCC AGGGCTCTTG CCAATGACCC GGAAGTATTG CTGATGGATG AACCTTTTAG TGCACTAGAT CCCCTTATTA GAAGAGAAAT GCAGCAAGAA CTGATTGACT TGCAATCAAA TTTAAAAAAG ACTATTGTAT TCATAACTCA TGATATCAAT GAAGCTTTTA AAATAGGGGA TAGGGTAGCA GTGATGAAAG ATGGTGTTTT TGAACAAGTT GGTACACCAG AAGAAATCTT AGACAATCCT GCAAGTGAGT ATATTAAGGA TTTTGTCAAA GACATTGATC GTTCCAAAGT TCTACAAGCT AAAGATGTTA TGTTCAATCC TTCGGCTATT ATTAATATTA ATGAAGGTTT GAAATCAGCT GTAAGAGAAA TGCAGACAAA CGGCATTTCA AGTGTATATG TGATTGATAA AAACAAGCAA TTACTTGGTA TTGTCAGTAT TGATGATGCT ATAGACGCAA TTAAAGAAAA TAAATTTCTA AGGGATGTTA TAACTGATAA TTACTATACT ACTGATCCGG AGATATACAT CCACGAATTA ATACCTGTGG CTAAAGATAG TAAATATCCC ATTGCAGTAG TTAATGATAA CAATGAATTG ATGGGAATTA TTGTAAGGAC ATCGGTGTTG GCTGCTTTAG TATAA
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Protein sequence | MTTNMSEKIK VKNLSKIFGP KPKSVLPLLE KNQSKEDILS KTGHTVGVNN VSFDVKEGET FVIMGLSGSG KSTLIRCLNL LNKPTTGEIY VNEDNILEFD KQKLRDFRQN QLSMVFQHFG LFTHRTVLEN VEFGLEIKGA SEQDRRELAR KTLESVGLKG WEDKMPSELS GGMQQRVGLA RALANDPEVL LMDEPFSALD PLIRREMQQE LIDLQSNLKK TIVFITHDIN EAFKIGDRVA VMKDGVFEQV GTPEEILDNP ASEYIKDFVK DIDRSKVLQA KDVMFNPSAI ININEGLKSA VREMQTNGIS SVYVIDKNKQ LLGIVSIDDA IDAIKENKFL RDVITDNYYT TDPEIYIHEL IPVAKDSKYP IAVVNDNNEL MGIIVRTSVL AALV
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