| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_2037 |
|---|
| Symbol | |
|---|
| ID | 6317155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | - |
|---|
| Start bp | 2152042 |
|---|
| End bp | 2154018 |
|---|
| Gene Length | 1977 bp |
|---|
| Protein Length | 658 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 642644425 |
|---|
| Product | Excinuclease ABC subunit B |
|---|
| Protein accession | YP_001918192 |
|---|
| Protein GI | 188586647 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
|---|
| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.00000674762 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAAT TTAAATTACA ATCTGACTTT TCACTTGAAG GAGATCAACC CAAAGCTGTT
GATGAACTGT GTGAAAGTTT AAATGGAGGT AATTCTCATC AAACACTGTT GGGAGTTACT
GGTTCAGGTA AAACCTTTAC AATGGCTAAT GTTATTCAAA GATTACAGCG TCCCACCCTT
GTTATTGCTC ATAATAAAAC ACTGGCAGCC CAATTATGTG GTGAGTTTAA AGAATTTTTC
CCCGAAAATG CAGTGGAATA TTTTGTGAGT TATTACGATT ACTATCAACC TGAAGCTTAT
ATACCTCAAA CAGATACTTA TATTGAGAAA GATGCTTCAA TTAATGATGA AATTGATAAA
TTACGCCATT CGGCAACAAG TGCTTTGTTT GAGAGAAGAG ATGTGATAAT TGTAGCTAGT
GTTTCCTGTA TATATGGTTT GGGGTCACCG GAAGAATACA GAGAACAGGT GTTATCTTTA
AGATGTGGAA TGGAAAAGGA CCGCGATGAA ATTCTAAAAG GATTAGTGGA CATCCAATAT
TCAAGAAATG ATGTTAACTT TACCCGCGGG ACCTTTCGAG TAAGAGGCGA TGTAATTGAA
GTTTTCCCAG CTTCTTATAC TGAAACAGCT GTTAGGATAG AACTGTTTGG TGATGAAATT
GAAAGGATAA CTGAAATAGA TACTTTGACA GGGGAAATAC TGGGAGAAAG AAATCATGTG
GCTATTTTTC CTGCATCCCA CTTTGTTACC CGTCGAAGCA AATTAGAAAA AGCCATTGAA
AGCATTCAGG AAGAGCTTCA TGAACAACTG GAATACTTAA AAAGACAAGG TAAAGCCGTA
GAAGCTAAAC GTTTAGAACA ACGAACCAAC TACGACTTGG AAATGCTACA AGAGATGGGT
TTTTGTCAAG GAATTGAGAA CTATTCTAGA CATTTGATCG GAAGACCTGC AGGAAGTAGA
CCTTATTGCT TAATTGACTA CTTTCCAGAT GATTATTTAA TGGTAGTAGA TGAATCTCAT
ATGACTATCC CTCAAATCAG GGGTATGTAT GCAGGGGATA TGTCCCGGAA ACAAAATCTT
GTAGACCATG GGTTTCGGCT TCCATCAGCC CTTGACAATA GGCCGTTGAA ATTTCAGGAA
TTTGAAAAAA TGATCAATCA AAATATTTAC GTTTCTGCTA CACCAGGACC ATACGAGAAA
GAACATAGTG AAAGAATAGT GGAGCAGATA ATCCGACCTA CAGGTCTAGT TGACCCTGAA
ACAGAAGTTA GGCCTGTGAA AGGGCAAATA GATGATCTAT ATAGTGAAAT TAATAAGCGA
ACAGACCGTA ATGAGAGAGT TTTAGTGACA ACATTAACTA AAAAGATGGC TGAAGATTTA
ACTGATTATT TGCGTGAAAT GGGAATTAGA GTAAGATATA TGCATTCAGA AATTGATACT
TTGGAGAGAA TGGAAATAAT TCGTGATTTG AGACTTGGTA AATTCGATGT ACTTGTAGGT
ATTAACTTGC TAAGAGAAGG ACTCGATCTA CCAGAAGTAA GTCTAGTTGC CATTTTGGAT
GCAGACAAAG AAGGCTATTT AAGGGATGAA AGGTCTTTAA TCCAAACTAT GGGCCGGGCT
GCCCGAAATG TAAACGGGCG AGTAATTATG TATGGGGATG CCATTACAGA TTCCATGCGA
AGAGCCATTG ATGAAACTAA TCGTAGGAGA GAAAAGCAGA TTGAATTTAA TGCGCGCCAT
AATATCACAC CACAAACTGT TCAAAAGAAA GTACATGATG TAATTGAAGC TACTAGATCT
GCAGAGGACG AAACTGAAGC TGCTACACCA GAAAACATTC AAGAAATGAG TGCCAAAGAA
CGTAAAGAGT TAATCGCTAA ATTACAGGAA GAAATGAAAC AGGCAGCGAA GGAATTAGAA
TTTGAAAAAG CAGCGGAATT AAGAGATTTA ATCATGGAGT TAAAAACTGC TCAATAG
|
|---|
| Protein sequence | MNEFKLQSDF SLEGDQPKAV DELCESLNGG NSHQTLLGVT GSGKTFTMAN VIQRLQRPTL
VIAHNKTLAA QLCGEFKEFF PENAVEYFVS YYDYYQPEAY IPQTDTYIEK DASINDEIDK
LRHSATSALF ERRDVIIVAS VSCIYGLGSP EEYREQVLSL RCGMEKDRDE ILKGLVDIQY
SRNDVNFTRG TFRVRGDVIE VFPASYTETA VRIELFGDEI ERITEIDTLT GEILGERNHV
AIFPASHFVT RRSKLEKAIE SIQEELHEQL EYLKRQGKAV EAKRLEQRTN YDLEMLQEMG
FCQGIENYSR HLIGRPAGSR PYCLIDYFPD DYLMVVDESH MTIPQIRGMY AGDMSRKQNL
VDHGFRLPSA LDNRPLKFQE FEKMINQNIY VSATPGPYEK EHSERIVEQI IRPTGLVDPE
TEVRPVKGQI DDLYSEINKR TDRNERVLVT TLTKKMAEDL TDYLREMGIR VRYMHSEIDT
LERMEIIRDL RLGKFDVLVG INLLREGLDL PEVSLVAILD ADKEGYLRDE RSLIQTMGRA
ARNVNGRVIM YGDAITDSMR RAIDETNRRR EKQIEFNARH NITPQTVQKK VHDVIEATRS
AEDETEAATP ENIQEMSAKE RKELIAKLQE EMKQAAKELE FEKAAELRDL IMELKTAQ
|
|---|
| |