Gene Nther_1965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1965 
Symbol 
ID6315912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2071676 
End bp2072359 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content32% 
IMG OID642644355 
ProductSpermine synthase 
Protein accessionYP_001918123 
Protein GI188586578 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000563558 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.560071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTATCCG AAACTATAAC AGCTGTTAAA AATGATGAAA AAGAACTTAA ATTAATAAAA 
AGGGGTCAAC ATTATGAGAT TATCTCTAAT GGCATTTTTT TAATGGCTAC TTATGGAGGA
AACAGTGAGC GGGAAATGGT TGAAGATGGT TTATTTTATG TGAGTCAATT TAAGTTGAAG
GATATAAAAG TCTTAATTGC AGGACTTGGT GTGGGTTATT CATTAATTCC GGCGGTAAAA
GACGACAGGG TTTCCAAGTT AGATGTAGTT GAGATGGAAC AAGAGATCAT AGATTGGAAT
AAAAAATACT TCTCAAAATA TAATGAAAAT TGCTTGGAAA ATGAAAAGGT AACAGTGATC
CAGGATGATA TTTATAACTA TCTTAAAAAT AACGCAGAGT TGGGCCATGA TTACTACGAT
TTGATCATTT TGGATGTTGA CAATGGTCCG GACTGGCTTG TAAGAGAAGA TAATAAACGA
TTATATCAAA AACAGGGAAT GGAATTAGTA AGTAAGTCAT TAAATCAAGG TGGTTATGTT
GCAATTTGGT CAATGGAAGA AAAAAGTAGC TTAGAAAATT CTTTATTGGC ATGTTACTCG
CAAGTTTTTA TCAGAGAATA TTTGTCCTAT GATGATAAAG GTAGGAAACA TAAAGATTCT
GTTTATTTTG CTCAAAAAAA CTAA
 
Protein sequence
MVSETITAVK NDEKELKLIK RGQHYEIISN GIFLMATYGG NSEREMVEDG LFYVSQFKLK 
DIKVLIAGLG VGYSLIPAVK DDRVSKLDVV EMEQEIIDWN KKYFSKYNEN CLENEKVTVI
QDDIYNYLKN NAELGHDYYD LIILDVDNGP DWLVREDNKR LYQKQGMELV SKSLNQGGYV
AIWSMEEKSS LENSLLACYS QVFIREYLSY DDKGRKHKDS VYFAQKN