Gene Nther_1943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1943 
Symbol 
ID6315855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2048910 
End bp2050262 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content41% 
IMG OID642644325 
Productefflux transporter, RND family, MFP subunit 
Protein accessionYP_001918102 
Protein GI188586557 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACAG AGCAAAAAAA TTCTAAATTC AAATTATCCA GAAATAAATT GATAGTTATT 
GGGTTGGCAG TTTTGGCGAT AGTAAGTGGT TATTTTATTA TCAATTTTAC CGGTGATGGA
TTTGCTGAAG AGGAGAATAG TAATGTCGAT AAGGAACAAG ACCACTCACT AGTAGATGTT
AAACAAGTGC CAAGGCAAAA CATTGAAAAA ACAGTAACAG TATCAGGGAA TGTTGAAGCT
GCCGATGATC GGTTGGTGAT TCCCCAAGCC AGTGGAGAAA TAGAAACAAT TCATTACGAA
GAAGGAGATA AAGTTAGTCA GGATGATATC TTAATGGAAA TAGATAGTGA AGACGCCAGA
CTACAAAGAC AAGAAGCCGA AGCTGCTTTA GACGCAGCCA GAGCTAATTT AGAAGAAGCT
GAGGCTGGAG CTCAAGATGC AGAGTTAGTC GAAGCTGAAA ATGCAGTATC TAATGCTGAA
GATAACTTAA GGCAAGCTGA AAAAGAACTT GAGAGAATAG AAGAAATGCA TCAAGAAGAA
TTTGCTACCG ATCAACAACT TGAACAAGCA GAAATGCAGT ACAATAATGC CAAGTCCCAA
CTTGAATCAG CTGAAGCTGC TAAGGATGCT GTAGAAGATG GCGCCAGACA GGAACAGCTT
GATGCTTTAG AGGCACAAGT GAGGCAAGCA GAAACTGGAG TAGAGCTAGC TAAGCGAGCG
GAAGAAAACA GTCAAGTGAA AGCACCAGCT TCAGGCACAA TAGTTTCCTC AGAGTTTAGT
GAAGGGGAAA TGGCCGGAGC GGGGGAACCT GCCTTTATGA TTATGGATCA GGATACTTTT
CAGGTGACGG CTACTGCCCC AGCCTCCTAT GTCCATCAGA TCTCTGTAGG GGACTCAACA
GAAATTAGAA TTCCCGCCCT TAACGAGAAT TTTCAAGGAG AGATTCAGCG TATTGGTGAG
ATTCCAGCAG AAAAAGGACG CAACTATCCT GTTGAAATAG CAATCACAGA GGAAAACAAT
GATCTCCGGA CTGGTATGTT TGCGGAAAAC TATCTAGTCA TTGAAAGACA TGTAGACGTC
CTGGCTGTTC CTCGTAGTTC TCTGGTAGAG CATAATGATG AAATAGGAAT CTATACGGTA
AACCAGGATA GTACAATAGA TTTTAATGTT TTAGAATTAG GAATTTCCCA GGAAGGGTAT
TTGCAAGTCG TTGATGGACT ACAAGAAGAT GATGTGATAG TCGTAGGCGG TCAATCAGAA
GTTGTTCCAG GAGAAGAAGT AAAGAAAAAT TATCTTCAAG AAGCAAAAAG TTCTGACATA
ACTAATGGTG AAAATCATGG GGGCGGTAAT TAA
 
Protein sequence
MTTEQKNSKF KLSRNKLIVI GLAVLAIVSG YFIINFTGDG FAEEENSNVD KEQDHSLVDV 
KQVPRQNIEK TVTVSGNVEA ADDRLVIPQA SGEIETIHYE EGDKVSQDDI LMEIDSEDAR
LQRQEAEAAL DAARANLEEA EAGAQDAELV EAENAVSNAE DNLRQAEKEL ERIEEMHQEE
FATDQQLEQA EMQYNNAKSQ LESAEAAKDA VEDGARQEQL DALEAQVRQA ETGVELAKRA
EENSQVKAPA SGTIVSSEFS EGEMAGAGEP AFMIMDQDTF QVTATAPASY VHQISVGDST
EIRIPALNEN FQGEIQRIGE IPAEKGRNYP VEIAITEENN DLRTGMFAEN YLVIERHVDV
LAVPRSSLVE HNDEIGIYTV NQDSTIDFNV LELGISQEGY LQVVDGLQED DVIVVGGQSE
VVPGEEVKKN YLQEAKSSDI TNGENHGGGN