Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_1943 |
Symbol | |
ID | 6315855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 2048910 |
End bp | 2050262 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 642644325 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_001918102 |
Protein GI | 188586557 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTACAG AGCAAAAAAA TTCTAAATTC AAATTATCCA GAAATAAATT GATAGTTATT GGGTTGGCAG TTTTGGCGAT AGTAAGTGGT TATTTTATTA TCAATTTTAC CGGTGATGGA TTTGCTGAAG AGGAGAATAG TAATGTCGAT AAGGAACAAG ACCACTCACT AGTAGATGTT AAACAAGTGC CAAGGCAAAA CATTGAAAAA ACAGTAACAG TATCAGGGAA TGTTGAAGCT GCCGATGATC GGTTGGTGAT TCCCCAAGCC AGTGGAGAAA TAGAAACAAT TCATTACGAA GAAGGAGATA AAGTTAGTCA GGATGATATC TTAATGGAAA TAGATAGTGA AGACGCCAGA CTACAAAGAC AAGAAGCCGA AGCTGCTTTA GACGCAGCCA GAGCTAATTT AGAAGAAGCT GAGGCTGGAG CTCAAGATGC AGAGTTAGTC GAAGCTGAAA ATGCAGTATC TAATGCTGAA GATAACTTAA GGCAAGCTGA AAAAGAACTT GAGAGAATAG AAGAAATGCA TCAAGAAGAA TTTGCTACCG ATCAACAACT TGAACAAGCA GAAATGCAGT ACAATAATGC CAAGTCCCAA CTTGAATCAG CTGAAGCTGC TAAGGATGCT GTAGAAGATG GCGCCAGACA GGAACAGCTT GATGCTTTAG AGGCACAAGT GAGGCAAGCA GAAACTGGAG TAGAGCTAGC TAAGCGAGCG GAAGAAAACA GTCAAGTGAA AGCACCAGCT TCAGGCACAA TAGTTTCCTC AGAGTTTAGT GAAGGGGAAA TGGCCGGAGC GGGGGAACCT GCCTTTATGA TTATGGATCA GGATACTTTT CAGGTGACGG CTACTGCCCC AGCCTCCTAT GTCCATCAGA TCTCTGTAGG GGACTCAACA GAAATTAGAA TTCCCGCCCT TAACGAGAAT TTTCAAGGAG AGATTCAGCG TATTGGTGAG ATTCCAGCAG AAAAAGGACG CAACTATCCT GTTGAAATAG CAATCACAGA GGAAAACAAT GATCTCCGGA CTGGTATGTT TGCGGAAAAC TATCTAGTCA TTGAAAGACA TGTAGACGTC CTGGCTGTTC CTCGTAGTTC TCTGGTAGAG CATAATGATG AAATAGGAAT CTATACGGTA AACCAGGATA GTACAATAGA TTTTAATGTT TTAGAATTAG GAATTTCCCA GGAAGGGTAT TTGCAAGTCG TTGATGGACT ACAAGAAGAT GATGTGATAG TCGTAGGCGG TCAATCAGAA GTTGTTCCAG GAGAAGAAGT AAAGAAAAAT TATCTTCAAG AAGCAAAAAG TTCTGACATA ACTAATGGTG AAAATCATGG GGGCGGTAAT TAA
|
Protein sequence | MTTEQKNSKF KLSRNKLIVI GLAVLAIVSG YFIINFTGDG FAEEENSNVD KEQDHSLVDV KQVPRQNIEK TVTVSGNVEA ADDRLVIPQA SGEIETIHYE EGDKVSQDDI LMEIDSEDAR LQRQEAEAAL DAARANLEEA EAGAQDAELV EAENAVSNAE DNLRQAEKEL ERIEEMHQEE FATDQQLEQA EMQYNNAKSQ LESAEAAKDA VEDGARQEQL DALEAQVRQA ETGVELAKRA EENSQVKAPA SGTIVSSEFS EGEMAGAGEP AFMIMDQDTF QVTATAPASY VHQISVGDST EIRIPALNEN FQGEIQRIGE IPAEKGRNYP VEIAITEENN DLRTGMFAEN YLVIERHVDV LAVPRSSLVE HNDEIGIYTV NQDSTIDFNV LELGISQEGY LQVVDGLQED DVIVVGGQSE VVPGEEVKKN YLQEAKSSDI TNGENHGGGN
|
| |