| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1938 |
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| Symbol | |
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| ID | 6315850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | - |
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| Start bp | 2041175 |
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| End bp | 2042563 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 642644320 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001918097 |
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| Protein GI | 188586552 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000755017 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAAAC AAAACCAGCA GATACAAAAA CAAAAGTCTT CAGGTACAGA TACAGAGGCT
CAAAACAAAA AAGCAACTTA CAATCAAGAG TCAAAAATTA GAACTTGGTT TAACAAAAAT
AAAAAAATAG TAAGTGGAGT GCTTTTAATA GTTTTAGTTC TGGCTGTTGG GTATTTGAAT
CGGGATTTGT TCTTTGAAGA GGAAATAGTT GTTGAAGAAG AACGCCCTTT AGTAGAAGTG
ACCAATCCTG AAATACAGGA TATCGAAAAA AAAGCCACAG TAATAGGAAG TGTAGATCCT
ACAGAAAGAA GGATTATAGT TCCGGAAGTT GCAGGTGAAG TGAAATCTCT TTATGTAGAA
GAAGGAGACT ATGTTAGCCA TGGTGATTTA TTAATGGAAC TAGATGATGG CGATTATCAA
CTTCAATTGG AAGAAGCTCA GGCAAACTTA GATGGAGCTA AAGCACAACT CGAAAATGCT
AAAAAGGGTG CTAGAACGGG AGAAAGAAAA GAAGCTGAAA CTAGTGTTGA AAGAGCCAGA
GAAGCGAAAG AGCAAATGGA AAGGGAATTA GAAAGAGTAG AAACATTACA TCAGGACGGT
TATGCCTCAG ATCAAGAACT GGAACAGATG ACTTTACAGT ACAAAAATGC AAAAGAGCAA
CTGAGGGCTG CTGAAGGCTA TAAACAATCA GTTGAAGAAG GAGCTAGGGA CGAAGAGTTA
GATGCCTTGC GATCCCAGAT AAAAAGGGCT GAAACAGGGG TAAAATTAGC TGAAAGAATG
ATTGATCGGA CTAAAATCAC AGCTCCTGTA GATGGTGAAA TTACTATGGT TGATGCCGAA
GAGGGAGAAC TAGTTGGTTC CGAATCCCCT GCCTTTGTAA TGCTAGATCC GGATAGCTAC
CAGGTGTTGG CTGGCTTACC TGAGTCTTAT GTAAACCAGG TTAGTGATGG AGAAACTGTC
GATGTTAAAA TTCCATCTGC TTTAGATGAA GAGTTTGAAG GAATGATACA TCACGTTGGT
CAATTGCCTC CAGAAGAAAA TGCTAAGGGA TATCCTATGG AAATAGAGTT AACACCTGAG
ATAGAAAAAC AAGTACGGGC TGGAATGTAT ACTCAAGTAA ATGTGACTAT AGAAAAATCT
GAAGATGCTC TAGCAATACC TCAACATGCA GTTGTAGAGG AAGAGGGAGA AACAGGAGTG
TTCATAGTTG ATGAAAGTAC AGAAAATCAA CAAGTACAAT TTATCGAGGT AAAAACAGGA
ATTAATGAAG ACGGTTACAT TGAAATCGTT TCAGGTCTAT CTGAAGATGA TTTAGTCATA
ATAGAGGGCT TTCAAGAAAT TGAACAAGGT ATCAGAGTAG ATGCGACAGA AATGGGTGAT
GATTCATGA
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| Protein sequence | MSKQNQQIQK QKSSGTDTEA QNKKATYNQE SKIRTWFNKN KKIVSGVLLI VLVLAVGYLN
RDLFFEEEIV VEEERPLVEV TNPEIQDIEK KATVIGSVDP TERRIIVPEV AGEVKSLYVE
EGDYVSHGDL LMELDDGDYQ LQLEEAQANL DGAKAQLENA KKGARTGERK EAETSVERAR
EAKEQMEREL ERVETLHQDG YASDQELEQM TLQYKNAKEQ LRAAEGYKQS VEEGARDEEL
DALRSQIKRA ETGVKLAERM IDRTKITAPV DGEITMVDAE EGELVGSESP AFVMLDPDSY
QVLAGLPESY VNQVSDGETV DVKIPSALDE EFEGMIHHVG QLPPEENAKG YPMEIELTPE
IEKQVRAGMY TQVNVTIEKS EDALAIPQHA VVEEEGETGV FIVDESTENQ QVQFIEVKTG
INEDGYIEIV SGLSEDDLVI IEGFQEIEQG IRVDATEMGD DS
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