Gene Nther_1912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_1912 
Symbol 
ID6315292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp2007393 
End bp2008454 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content36% 
IMG OID642644294 
ProductIntegrase catalytic region 
Protein accessionYP_001918071 
Protein GI188586526 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAG TTGTATGCCC TAGATGCAAT AATAACTGCT CTGACAAGTT TTATAGGTTT 
GGTTTTGATA ATCATGGTCA TCAAAAGTAT CAATGTCAAG AATGTTTTAG TCAGTTTGCA
CCTAAGACAC TTTCTAAAGG CGGGGATAAA AGAGGTCCTA ATAAACCTCG TAAATATCCC
TCTTGCCCTA AATGCGGTAA AGCTACGTTT TTACATCACG ACTATGAATT TTATTCTAAT
TTGAGGTGTT GGGACAAAAG CTGTAATCAT TCTTTCTATG TCCCTAAACC TCAAAGTATT
CCTGAACCTT CGCAACTTGA TATTGACGGC AAAGTAGACT TCTCTAACAT GAGACATTCT
CTTCATACTG TTATTCGAGC TCTTTACCTG TACTTTATCA ATGGTAGCTC TACTAGAGGT
GTCTCACAGT TCCTTATTGA TTGTGAAGGA ATTAAAGTAT CTCATGTTAC TATTGCTGAC
TGGACTAAAA AGTTTGCTCC TCTGTTTCTT TATATCTCTA GATATCTAAA GCCAATAGAT
CTTGACTCTT CTGATGAGTG GCATGTCGAC GAAACTGTAA TTAAAATTAA AGGCAAAAGA
TTCTACGCCT GGACTGTTAT TGATGCTGAA ACTAGATTTG TGCTTGCATT TCATCTATCT
CCTTACAGAG ATAGCCAGGC TGCTTTTAAA GTGCTGAACT ATGCTAAGAA ACATTTTGGA
CAGCCTCATA GTATCGTTAC AGATAGATAC TGGGCTTACA ATGCTCCAAT TAAAGTTCTG
TTTCCAAACT CTAATCACAT CAGAGTCGAG TCTTTTCAAG ATGATATCTC TAATAACTTA
ATTGAATCTT TTTTTCAGAT TTTCAAAAGC TGGGTTAAGC AACGCAGAGG ATTTGCTTCT
TTCCAGTCAG CCAACAAGTT GATTGCGGTA TTTGTGTTTG CTTTTAACTT TGTTAGGACA
AGCAATGTTT TGAATCAGTC TACTCCTGCT CAAGTTGCTG GGATTAATTA CTCTAATCGT
AATAGGACTT TTTGGCTTTT ACATAGTAAT AATGCCGCTT GA
 
Protein sequence
MTKVVCPRCN NNCSDKFYRF GFDNHGHQKY QCQECFSQFA PKTLSKGGDK RGPNKPRKYP 
SCPKCGKATF LHHDYEFYSN LRCWDKSCNH SFYVPKPQSI PEPSQLDIDG KVDFSNMRHS
LHTVIRALYL YFINGSSTRG VSQFLIDCEG IKVSHVTIAD WTKKFAPLFL YISRYLKPID
LDSSDEWHVD ETVIKIKGKR FYAWTVIDAE TRFVLAFHLS PYRDSQAAFK VLNYAKKHFG
QPHSIVTDRY WAYNAPIKVL FPNSNHIRVE SFQDDISNNL IESFFQIFKS WVKQRRGFAS
FQSANKLIAV FVFAFNFVRT SNVLNQSTPA QVAGINYSNR NRTFWLLHSN NAA